RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	INAVA	Q3KP66	663 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	SETMAR	Q53H47	684 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CFAP58	Q5T655	872 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	FAM72A	Q5TYM5	149 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	MANEAL	Q5VSG8	457 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	PLEKHA7	Q6IQ23	1121 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	FAM72D	Q6L9T8	149 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	FBXL19	Q6PCT2	694 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	LAYN	Q6UX15	382 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	LEKR1	Q6ZMV7	388 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	FAM72B	Q86X60	149 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	DNAAF5	Q86Y56	855 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	RTL3	Q8N8U3	475 aa	Known RBP	10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	SLC6A18	Q96N87	628 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CAPN11	Q9UMQ6	739 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	DOCK9	Q9BZ29	2069 aa		10.86	□□□□□ -0.67
CDK11A-222	ENST00000498810	CNOT1	A5YKK6	2376 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SPTBN2	O15020	2390 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	TRPM6	Q9BX84	2022 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CACNA1A	O00555	2505 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810		A0A1W2PPC4	97 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	TCRBV5S1A1T	A0A578	114 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	EIF3CL	B5ME19	914 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	KRIT1	O00522	736 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	NEMP1	O14524	444 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SMAD6	O43541	496 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PLRG1	O43660	514 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	LEFTY1	O75610	366 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	IGSF6	O95976	241 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CEACAM1	P13688	526 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	XPA	P23025	273 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CASP14	P31944	242 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	HTR7	P34969	479 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	DRD3	P35462	400 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	GJC1	P36383	396 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ARL4A	P40617	200 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CCR5	P51681	352 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CCNH	P51946	323 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	NEK3	P51956	506 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	METAP1	P53582	386 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PPP2CB	P62714	309 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	RACK1	P63244	317 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PPP2CA	P67775	309 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ARF5	P84085	180 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	OGDH	Q02218	1023 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	LBR	Q14739	615 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SUZ12	Q15022	739 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	HLA-B	Q31612	363 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PARP15	Q460N3	678 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CARD16	Q5EG05	197 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CCDC122	Q5T0U0	273 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZFYVE27	Q5T4F4	411 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ERMARD	Q5T6L9	678 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	DPY19L3	Q6ZPD9	716 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	NLRP14	Q86W24	1093 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	NAXD	Q8IW45	347 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	CHST14	Q8NCH0	376 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	TMIE	Q8NEW7	156 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	OR2A12	Q8NGT7	310 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	OR6K2	Q8NGY2	324 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	HSPH1	Q92598	858 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SYN2	Q92777	582 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ARHGEF2	Q92974	986 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	GDAP1L1	Q96MZ0	367 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	EIF3C	Q99613	913 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	MYOC	Q99972	504 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	HEPH	Q9BQS7	1158 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SYT11	Q9BT88	431 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SNRNP25	Q9BV90	132 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ZWILCH	Q9H900	591 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SP110	Q9HB58	689 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PREB	Q9HCU5	417 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	TM7SF3	Q9NS93	570 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	NDFIP2	Q9NV92	336 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	DNAAF2	Q9NVR5	837 aa	Known RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	HECA	Q9UBI9	543 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ANAPC7	Q9UJX3	599 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	SARDH	Q9UL12	918 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	PPM1H	Q9ULR3	514 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ANKRD6	Q9Y2G4	727 aa		10.85	□□□□□ -0.67
CDK11A-222	ENST00000498810	ARHGAP42	A6NI28	874 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	RASA4B	C9J798	803 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810		H3BRJ5	948 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	DFFA	O00273	331 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	GIPC1	O14908	333 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	RASA4	O43374	803 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	LZTS3	O60299	673 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	MAGEC1	O60732	1142 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	RNGTT	O60942	597 aa	Known RBP	10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	GYPC	P04921	128 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	IGHV4-34	P06331	123 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	MX2	P20592	715 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	CD38	P28907	300 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	NUDT1	P36639	197 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	PBX1	P40424	430 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	YBEY	P58557	167 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	SIM1	P81133	766 aa	Predicted RBP	10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	IL9R	Q01113	521 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	SLC14A1	Q13336	389 aa		10.84	□□□□□ -0.67
CDK11A-222	ENST00000498810	HNRNPD	Q14103	355 aa	Known RBP	10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms