RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 PARS2Q7L3T8 475 aaKnown RBP16.98■□□□□ 0.31
PRKCB-210ENST00000498739 SRLQ86TD4 932 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 CCDC13Q8IYE1 715 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 TBC1D3Q8IZP1 549 aaPredicted RBP16.98■□□□□ 0.31
PRKCB-210ENST00000498739 VOPP1Q96AW1 172 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 HAUS1Q96CS2 278 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 TSGA13Q96PP4 275 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 LGMNQ99538 433 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 HEMGNQ9BXL5 484 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 HDAC8Q9BY41 377 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 CPEB1Q9BZB8 566 aaKnown RBP16.98■□□□□ 0.31
PRKCB-210ENST00000498739 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 SMOC1Q9H4F8 434 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 NT5MQ9NPB1 228 aa16.98■□□□□ 0.31
PRKCB-210ENST00000498739 MYO15AQ9UKN7 3530 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 C16orf96A6NNT2 1141 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PPP1R12AO14974 1030 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 GJB3O75712 270 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PYGMP11217 842 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 ADRB3P13945 408 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 CSNK1DP48730 415 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 NR2C2P49116 596 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 MAXP61244 160 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PPIDQ08752 370 aaKnown RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 NSUN2Q08J23 767 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 AP1B1Q10567 949 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 HNRNPDQ14103 355 aaKnown RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 GRM3Q14832 879 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PDK1Q15118 436 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 AADACL2Q6P093 401 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 SYT12Q8IV01 421 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PGBD5Q8N414 524 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 MAML1Q92585 1016 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 P3H4Q92791 437 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 BIRC7Q96CA5 298 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 OLFM3Q96PB7 478 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 ALS2CR12Q96Q35 445 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 MIR1-1HGQ9H1L0 117 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 KDM4CQ9H3R0 1056 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 PARD6AQ9NPB6 346 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 SEMA4GQ9NTN9 838 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 TMEM74BQ9NUR3 256 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 SAE1Q9UBE0 346 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-210ENST00000498739 NUP205Q92621 2012 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
PRKCB-210ENST00000498739 TTC24A2A3L6 582 aaPredicted RBP16.96■□□□□ 0.31
PRKCB-210ENST00000498739 LRP3O75074 770 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 CCNB1P14635 433 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 SERPINA4P29622 427 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 DPP6P42658 865 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 TAS2R38P59533 333 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 AP1S1P61966 158 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 BCL2L1Q07817 233 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 ITKQ08881 620 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 ZNF211Q13398 564 aaPredicted RBP16.96■□□□□ 0.31
PRKCB-210ENST00000498739 PLA2G2CQ5R387 149 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 CFAP58Q5T655 872 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 CCDC181Q5TID7 509 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 BBS12Q6ZW61 710 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 BZW1Q7L1Q6 419 aaKnown RBP16.96■□□□□ 0.31
PRKCB-210ENST00000498739 TEX26Q8N6G2 289 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 PAF1Q8N7H5 531 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 FATE1Q969F0 183 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 HES6Q96HZ4 224 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 TUBGCP5Q96RT8 1024 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 MGME1Q9BQP7 344 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 OSBPL8Q9BZF1 889 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 ATP13A3Q9H7F0 1226 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 VPS45Q9NRW7 570 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 RBM22Q9NW64 420 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKCB-210ENST00000498739 EIF2B4Q9UI10 523 aaKnown RBP16.96■□□□□ 0.31
PRKCB-210ENST00000498739 PILRBQ9UKJ0 227 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 TTLL3Q9Y4R7 772 aa16.96■□□□□ 0.31
PRKCB-210ENST00000498739 DMDP11532 3685 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 KCNK1O00180 336 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 IGHV4-34P06331 123 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 PTPN7P35236 360 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 ABL2P42684 1182 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 MAPK8P45983 427 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 PPP2CBP62714 309 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 PPP2CAP67775 309 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 CSRP2Q16527 193 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-210ENST00000498739 CAMK1DQ8IU85 385 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 DNASE2BQ8WZ79 361 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 ZNF641Q96N77 438 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-210ENST00000498739 NUDCD1Q96RS6 583 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 HERPUD2Q9BSE4 406 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 POLR1EQ9GZS1 481 aaKnown RBP16.95■□□□□ 0.3
PRKCB-210ENST00000498739 BRD8Q9H0E9 1235 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 PREBQ9HCU5 417 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 HAUS2Q9NVX0 235 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
PRKCB-210ENST00000498739 EFR3BQ9Y2G0 817 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms