RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 STAT4Q14765 748 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 KIF19Q2TAC6 998 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 SETMARQ53H47 684 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-213ENST00000498495 PARS2Q7L3T8 475 aaKnown RBP12.97□□□□□ -0.33
HSPG2-213ENST00000498495 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 SRLQ86TD4 932 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 HORMAD1Q86X24 394 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 RHOT1Q8IXI2 618 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 ATPAF2Q8N5M1 289 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
HSPG2-213ENST00000498495 OR2I1PQ8NGU4 316 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 RAPGEF5Q92565 580 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 SLC6A18Q96N87 628 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 SUV39H2Q9H5I1 410 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 GAREM1Q9H706 876 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 ANKRD6Q9Y2G4 727 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 FADS3Q9Y5Q0 445 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 ALG6Q9Y672 507 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 NYNRINQ9P2P1 1898 aaKnown RBP12.97□□□□□ -0.33
HSPG2-213ENST00000498495 PI4KAP42356 2102 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 GVINP1Q7Z2Y8 2422 aa12.97□□□□□ -0.33
HSPG2-213ENST00000498495 LRRD1A4D1F6 860 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 PRAMEF26H0Y7S4 382 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 VILLO15195 856 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 SLC31A1O15431 190 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 TSPAN6O43657 245 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 AP1G1O43747 822 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 MAFKO60675 156 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 CER1O95813 267 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 FECHP22830 423 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 XPAP23025 273 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 CSNK1DP48730 415 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 SCNN1BP51168 640 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 HADHBP55084 474 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 NAP1L1P55209 391 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 RPS21P63220 83 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 PAFAH1B3Q15102 231 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 HLA-BQ31612 363 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 CFAP58Q5T655 872 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 LRRC38Q5VT99 294 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 NCBP2-AS2Q69YL0 99 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 NAPEPLDQ6IQ20 393 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 PAF1Q8N7H5 531 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 HCAR2Q8TDS4 363 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 KLK6Q92876 244 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 RNF157Q96PX1 679 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 DDX56Q9NY93 547 aaKnown RBP12.96□□□□□ -0.33
HSPG2-213ENST00000498495 DKK3Q9UBP4 350 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 HYOU1Q9Y4L1 999 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 SNX11Q9Y5W9 270 aa12.96□□□□□ -0.33
HSPG2-213ENST00000498495 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.34
HSPG2-213ENST00000498495 A0A0A6YYK5 440 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 KCNK3O14649 394 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 WNT9AO14904 365 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 TIMP2P16035 220 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 KCNA4P22459 653 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 BNC1Q01954 994 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 BCL2L1Q07817 233 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 SGCGQ13326 291 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 SLC14A1Q13336 389 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF235Q14590 738 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 MARC1Q5VT66 337 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 KIAA1161Q6NSJ0 714 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 CAMK1DQ8IU85 385 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 PQLC3Q8N755 202 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 VOPP1Q96AW1 172 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 CALR3Q96L12 384 aaKnown RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 SLC17A9Q9BYT1 436 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
HSPG2-213ENST00000498495 ZFR2Q9UPR6 939 aaKnown RBP12.95□□□□□ -0.34
HSPG2-213ENST00000498495 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 A0A1W2PR77 199 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 TLR4O00206 839 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 MFSD11O43934 449 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 KCNK5O95279 499 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 MAP3K6O95382 1288 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 PIGNO95427 931 aa12.94□□□□□ -0.34
HSPG2-213ENST00000498495 PEX11BO96011 259 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms