RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARFGAP3Q9NP61 516 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 LRFN1Q9P244 771 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 FBXO40Q9UH90 709 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 BAG5Q9UL15 447 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 A0A1B0GVY2 172 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 LGALS16A8MUM7 142 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 ITGA2BP08514 1039 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 BRWD1-AS2P59051 145 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 LPIN1Q14693 890 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 RPS6KA2Q15349 733 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 CALCRLQ16602 461 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 MAP9Q49MG5 647 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 GDPD4Q6W3E5 623 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 NEK10Q6ZWH5 1172 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 MAB21L3Q8N8X9 362 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 ZNF441Q8N8Z8 693 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 MCPH1Q8NEM0 835 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 TRIB2Q92519 343 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 PABPC3Q9H361 631 aaKnown RBP3.96□□□□□ -1.78
SMC4-227ENST00000497984 CHST12Q9NRB3 414 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 THAP1Q9NVV9 213 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 NLKQ9UBE8 527 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 DHDHQ9UQ10 334 aa3.96□□□□□ -1.78
SMC4-227ENST00000497984 CPED1A4D0V7 1026 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 ERI2A8K979 691 aaKnown RBP3.95□□□□□ -1.78
SMC4-227ENST00000497984 HNRNPCL2B2RXH8 293 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 TFRCP02786 760 aaKnown RBP3.95□□□□□ -1.78
SMC4-227ENST00000497984 IFIT2P09913 472 aaKnown RBP3.95□□□□□ -1.78
SMC4-227ENST00000497984 MYF6P23409 242 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 PPM1AP35813 382 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 TECP42680 631 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 HTR3AP46098 478 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 MTNR1AP48039 350 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 ZNF132P52740 706 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 MVDP53602 400 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 AP2B1P63010 937 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 PHEXP78562 749 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 FCN2Q15485 313 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 RPE65Q16518 533 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 KLHL24Q6TFL4 600 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 CTCFLQ8NI51 663 aaPredicted RBP3.95□□□□□ -1.78
SMC4-227ENST00000497984 FEM1CQ96JP0 617 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 HERC2P3Q9BVR0 1158 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 GFRA4Q9GZZ7 299 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 OR6C3Q9NZP0 311 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 NDUFAF4Q9P032 175 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 CDC23Q9UJX2 597 aa3.95□□□□□ -1.78
SMC4-227ENST00000497984 GREB1LQ9C091 1923 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 FAM172BPA6NC97 362 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 OR6C68A6NDL8 312 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 ANTXRLA6NF34 631 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 P2RY10O00398 339 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 STRNO43815 780 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE7O76087 117 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 KDM4BO94953 1096 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 CBX6O95503 412 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 CRYAAP02489 173 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 APOHP02749 345 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE12FP0CL80 117 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE12GP0CL81 117 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE12IP0CL82 117 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 CTPS1P17812 591 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GJC1P36383 396 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 KRTAP10-3P60369 221 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE1Q13065 139 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 GAGE4Q13068 117 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 ZBTB17Q13105 803 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 PLEKHO1Q53GL0 409 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 DCAF6Q58WW2 860 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 LIN54Q6MZP7 749 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 SYNE3Q6ZMZ3 975 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 RINLQ6ZS11 566 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 TOGARAM2Q6ZUX3 1019 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 RASGRP2Q7LDG7 609 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 TRMT1LQ7Z2T5 733 aaKnown RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 MB21D2Q8IYB1 491 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 CIARTQ8N365 385 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 GALNT15Q8N3T1 639 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 KBTBD3Q8NAB2 608 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 OTUD7AQ8TE49 926 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 USP13Q92995 863 aaPredicted RBP3.94□□□□□ -1.78
SMC4-227ENST00000497984 C3orf49Q96BT1 292 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 DUX3Q96PT4 197 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 OR1F2PQ96R84 312 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 TMLHEQ9NVH6 421 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 SMARCAL1Q9NZC9 954 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 KCND3Q9UK17 655 aa3.94□□□□□ -1.78
SMC4-227ENST00000497984 FFAR2O15552 330 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 CLDN14O95500 239 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 LINC00271P0C7V0 271 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 PTPN9P43378 593 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 NLRP5P59047 1200 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 SLC18A2Q05940 514 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 PDCLQ13371 301 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 CAPSQ13938 189 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 ME3Q16798 604 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 C14orf177Q52M58 125 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 CCDC146Q8IYE0 955 aa3.93□□□□□ -1.78
SMC4-227ENST00000497984 WDSUB1Q8N9V3 476 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms