RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PPM1KQ8N3J5 372 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 SLC2A13Q96QE2 648 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 MED15Q96RN5 788 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 HEPHQ9BQS7 1158 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
VIM-208ENST00000497849 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.74■□□□□ 0.27
VIM-208ENST00000497849 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
VIM-208ENST00000497849 MAPK10P53779 464 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 YPEL5P62699 121 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 PPARDQ03181 441 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 MACC1Q6ZN28 852 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 ZNF683Q8IZ20 524 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 FSTL5Q8N475 847 aaPredicted RBP16.74■□□□□ 0.27
VIM-208ENST00000497849 LMO3Q8TAP4 145 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 JPH3Q8WXH2 748 aaPredicted RBP16.74■□□□□ 0.27
VIM-208ENST00000497849 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 ANAPC2Q9UJX6 822 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 DOCK4Q8N1I0 1966 aa16.74■□□□□ 0.27
VIM-208ENST00000497849 I6L893 689 aaPredicted RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 CMA1P23946 247 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 CD82P27701 267 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 EIF4A3P38919 411 aaKnown RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 FMO5P49326 533 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 CCNHP51946 323 aaPredicted RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 ELOCQ15369 112 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 TCEA2Q15560 299 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 CARD16Q5EG05 197 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 LVRNQ6Q4G3 990 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 RRAGAQ7L523 313 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 TMPRSS9Q7Z410 1059 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 SETD3Q86TU7 594 aaPredicted RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 VPS36Q86VN1 386 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 OR7D4Q8NG98 312 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 VOPP1Q96AW1 172 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 TMEM159Q96B96 161 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 SIK2Q9H0K1 926 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 GOLPH3LQ9H4A5 285 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 METTL14Q9HCE5 456 aaKnown RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 MBNL1Q9NR56 388 aaKnown RBP16.73■□□□□ 0.27
VIM-208ENST00000497849 TUBD1Q9UJT1 453 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 DOLKQ9UPQ8 538 aa16.73■□□□□ 0.27
VIM-208ENST00000497849 CHD5Q8TDI0 1954 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 C16orf96A6NNT2 1141 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 M0QYT0 321 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 ZMPSTE24O75844 475 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
VIM-208ENST00000497849 HK3P52790 923 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 NME3Q13232 169 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 NCAPHQ15003 741 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 CCNJLQ8IV13 435 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 SLITRK4Q8IW52 837 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 ARHGEF19Q8IW93 802 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 PCDH20Q8N6Y1 951 aaKnown RBP16.72■□□□□ 0.27
VIM-208ENST00000497849 Q8N9G6 341 aaPredicted RBP16.72■□□□□ 0.27
VIM-208ENST00000497849 SCG3Q8WXD2 468 aaKnown RBP16.72■□□□□ 0.27
VIM-208ENST00000497849 RAB7BQ96AH8 199 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 CMKLR1Q99788 373 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 EDEM3Q9BZQ6 932 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 CEP44Q9C0F1 390 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
VIM-208ENST00000497849 GPR34Q9UPC5 381 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 PLAAQ9Y263 795 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 SNX10Q9Y5X0 201 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 ACTL7AQ9Y615 435 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 RNF215Q9Y6U7 377 aa16.72■□□□□ 0.27
VIM-208ENST00000497849 NEMP1O14524 444 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 GRAP2O75791 330 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ADCY5O95622 1261 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 CD160O95971 181 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ALPIP09923 528 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 GKP32189 559 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 DNA2P51530 1060 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ARSDP51689 593 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 PMS1P54277 932 aaKnown RBP16.71■□□□□ 0.27
VIM-208ENST00000497849 ARF5P84085 180 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 MTA1Q13330 715 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 PDCLQ13371 301 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 C16orf72Q14CZ0 275 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 MEA1Q16626 185 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ALG11Q2TAA5 492 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ARTNQ5T4W7 220 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 OTUD1Q5VV17 481 aaPredicted RBP16.71■□□□□ 0.27
VIM-208ENST00000497849 TFAP2DQ7Z6R9 452 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 TP53I13Q8NBR0 393 aaPredicted RBP16.71■□□□□ 0.27
VIM-208ENST00000497849 GPR156Q8NFN8 814 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 OR6C4Q8NGE1 309 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 NKD1Q969G9 470 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 TSACCQ96A04 125 aaPredicted RBP16.71■□□□□ 0.27
VIM-208ENST00000497849 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 B3GNT4Q9C0J1 378 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 ZDHHC6Q9H6R6 413 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 LRRC4CQ9HCJ2 640 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 APPL1Q9UKG1 709 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
VIM-208ENST00000497849 FCF1Q9Y324 198 aaKnown RBP16.71■□□□□ 0.27
VIM-208ENST00000497849 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 DRGXA6NNA5 263 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms