RNA–Protein interactions for RNA: ENST00000497617.1

TSFM-206, Transcript of Ts translation elongation factor, mitochondrial, human

TSL 3

Gene TSFM, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSFM-206	ENST00000497617	KCTD15	Q96SI1	283 aa	Predicted RBP	13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	SLC17A9	Q9BYT1	436 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	TRIM7	Q9C029	511 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	TTYH3	Q9C0H2	523 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	NOL6	Q9H6R4	1146 aa	Known RBP	13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	ERVMER34-1	Q9H9K5	563 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	IFNK	Q9P0W0	207 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	IGF2R	P11717	2491 aa		13.55	□□□□□ -0.24
TSFM-206	ENST00000497617	USP24	Q9UPU5	2620 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	CXorf51A	A0A1B0GTR3	108 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	IGLON5	A6NGN9	336 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	WASH4P	A8MWX3	477 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	EIF3CL	B5ME19	914 aa	Known RBP	13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	C10orf142	B7Z368	130 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	FPGT	O14772	594 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	FFAR2	O15552	330 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	TSPAN6	O43657	245 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	ABL2	P42684	1182 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	DAB2	P98082	770 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	DNAJC3	Q13217	504 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	SMTNL2	Q2TAL5	461 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	FIGN	Q5HY92	759 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	GCNT7	Q6ZNI0	430 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617		Q6ZSR6	202 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	RFX8	Q6ZV50	586 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	PLPP6	Q8IY26	295 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	UMODL1-AS1	Q8N2C9	162 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	GALNT15	Q8N3T1	639 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	TMEM145	Q8NBT3	493 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	CXorf40A	Q8TE69	158 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	HSPH1	Q92598	858 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	PEBP4	Q96S96	227 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	EIF3C	Q99613	913 aa	Known RBP	13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	ZWILCH	Q9H900	591 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	DNAJC28	Q9NX36	388 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	TOR4A	Q9NXH8	423 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	GGT7	Q9UJ14	662 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	LUC7L2	Q9Y383	392 aa	Known RBP	13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	BZW2	Q9Y6E2	419 aa	Known RBP	13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	MYLK	Q15746	1914 aa		13.54	□□□□□ -0.24
TSFM-206	ENST00000497617	AKAP13	Q12802	2813 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617		A0A1W2PQJ5	194 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	FAM149A	A5PLN7	773 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617		H3BRJ5	948 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617		J3KR12	359 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	AP1G1	O43747	822 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	LRCH4	O75427	683 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	RFPL3	O75679	317 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	PIGN	O95427	931 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	SERPING1	P05155	500 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	ERCC2	P18074	760 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	ARL4A	P40617	200 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	RXRG	P48443	463 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	PAPOLA	P51003	745 aa	Known RBP	13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	NDST2	P52849	883 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	ZBED6	P86452	979 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	ZSCAN23	Q3MJ62	389 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	TMEM259	Q4ZIN3	620 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	INO80D	Q53TQ3	878 aa	Predicted RBP	13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	ZNF542P	Q5EBM4	170 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	FNIP1	Q8TF40	1166 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	WRAP53	Q9BUR4	548 aa	Known RBP	13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	CINP	Q9BW66	212 aa	Predicted RBP	13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	C1QTNF7	Q9BXJ2	289 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	SLC39A8	Q9C0K1	460 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617	LHX3	Q9UBR4	397 aa		13.53	□□□□□ -0.24
TSFM-206	ENST00000497617		H3BM21	787 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	INSIG1	O15503	277 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	MMP20	O60882	483 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	PALM	O75781	387 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	HNF1B	P35680	557 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	GJC1	P36383	396 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	THOP1	P52888	689 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	PDE1C	Q14123	709 aa	Predicted RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	KYAT3	Q6YP21	454 aa	Known RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	ZSCAN30	Q86W11	494 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	MARCH9	Q86YJ5	346 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	KDF1	Q8NAX2	398 aa	Predicted RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	FAM174A	Q8TBP5	190 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	IQCD	Q96DY2	449 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	THAP2	Q9H0W7	228 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	CCDC86	Q9H6F5	360 aa	Known RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	KLHL11	Q9NVR0	708 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	ANAPC7	Q9UJX3	599 aa		13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.52	□□□□□ -0.25
TSFM-206	ENST00000497617	POM121B	A6NF01	834 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	RAD51B	O15315	384 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	PRAMEF11	O60813	436 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	TM7SF2	O76062	418 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	ALPPL2	P10696	532 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	JUP	P14923	745 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	RABIF	P47224	123 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	FGL2	Q14314	439 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	PIGH	Q14442	188 aa	Predicted RBP	13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	KRT81	Q14533	505 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	CYTH1	Q15438	398 aa		13.51	□□□□□ -0.25
TSFM-206	ENST00000497617	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms