RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 CERCAMQ5T4B2 595 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 PRR23CQ6ZRP0 262 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 XYLT1Q86Y38 959 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 PYROXD2Q8N2H3 581 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 SFRP1Q8N474 314 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 AFAP1L2Q8N4X5 818 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 HDAC10Q969S8 669 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 GGA3Q9NZ52 723 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 DKK3Q9UBP4 350 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 NFASCO94856 1347 aa10.73□□□□□ -0.69
TRAPPC12-223ENST00000497597 ALOX12P18054 663 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CCND2P30279 289 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PTPN9P43378 593 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 BCAT1P54687 386 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CTBP1Q13363 440 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 AMHR2Q16671 573 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CCDC142Q17RM4 750 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TREML2Q5T2D2 321 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 STYK1Q6J9G0 422 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TICAM1Q8IUC6 712 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PLD3Q8IV08 490 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MICU2Q8IYU8 434 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LRRC71Q8N4P6 559 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 OR2T34Q8NGX1 318 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 OR2T3Q8NH03 318 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TANKQ92844 425 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 VPS39Q96JC1 886 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ELMO2Q96JJ3 720 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 FAR2Q96K12 515 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MUS81Q96NY9 551 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 C9orf16Q9BUW7 83 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 REXO4Q9GZR2 422 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 UNC93B1Q9H1C4 597 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ZBTB26Q9HCK0 441 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 HACD3Q9P035 362 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 KIAA1522Q9P206 1035 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MAGED1Q9Y5V3 778 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SNX9Q9Y5X1 595 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MAST2Q6P0Q8 1798 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ACOT8O14734 319 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SEC24AO95486 1093 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LSM8O95777 96 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PSAPP07602 524 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SNRPB2P08579 225 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PHC1P78364 1004 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 C4orf19Q8IY42 314 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CMASQ8NFW8 434 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TRPC4APQ8TEL6 797 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 HTR3CQ8WXA8 447 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SNX19Q92543 992 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 EMID1Q96A84 441 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MAELQ96JY0 434 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SH3GL1Q99961 368 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 POMKQ9H5K3 350 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LTB4R2Q9NPC1 389 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 DUS2Q9NX74 493 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MTRRQ9UBK8 725 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PSME2Q9UL46 239 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 RAD51BO15315 384 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 DGAT1O75907 488 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SLC4A1P02730 911 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 HSPA1AP0DMV8 641 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 HSPA1BP0DMV9 641 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 GLDCP23378 1020 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CLK3P49761 638 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 GRM3Q14832 879 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 SPCS2Q15005 226 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 BROXQ5VW32 411 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PRR5LQ6MZQ0 368 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 FAM183BPQ6ZVS7 135 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PCYOX1LQ8NBM8 494 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ACMSDQ8TDX5 336 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TRUB1Q8WWH5 349 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TFAP2CQ92754 450 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LRRC39Q96DD0 335 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LRCH3Q96II8 777 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 CHID1Q9BWS9 393 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ANKRD60Q9BZ19 345 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 LHPPQ9H008 270 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ATXN3LQ9H3M9 355 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 MRPL40Q9NQ50 206 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 GDAP2Q9NXN4 497 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ERVK-11Q9UQG0 969 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
TRAPPC12-223ENST00000497597 ASS1P00966 412 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 IL1R1P14778 569 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 PGAM1P18669 254 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 NOVP48745 357 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 PTPN11Q06124 597 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SCIMPQ6UWF3 145 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms