RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TXNDC5Q8NBS9 432 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 OR2T3Q8NH03 318 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 RPLP0P6Q8NHW5 317 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 RUBCNQ92622 972 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 VOPP1Q96AW1 172 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 ECHDC3Q96DC8 303 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 FAM129BQ96TA1 746 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 ERP44Q9BS26 406 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 FRMD8Q9BZ67 464 aaPredicted RBP19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 MFSD1Q9H3U5 465 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 ARNT2Q9HBZ2 717 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 SCUBE2Q9NQ36 999 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 DLGAP2Q9P1A6 1054 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 RSPH14Q9UHP6 348 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 ACTL7AQ9Y615 435 aa19.98■□□□□ 0.79
SCAMP3-209ENST00000497470 A0A1W2PQF6 199 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 TSPAN11A1L157 253 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 TMEM221A6NGB7 291 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 BHMG1C9JSJ3 638 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 M0R296 226 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SIN3BO75182 1162 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SUN1O94901 812 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SLU7O95391 586 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 MMP2P08253 660 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 HOXB2P14652 356 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 NFKB1P19838 968 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SERPINA4P29622 427 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 RGRP47804 291 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SCNN1BP51168 640 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SKOR1P84550 965 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 C2orf54Q08AI8 447 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 NIPAL4Q0D2K0 466 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 KCTD11Q693B1 232 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 C8orf74Q6P047 294 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 BRAT1Q6PJG6 821 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 LEKR1Q6ZMV7 388 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 PRPF39Q86UA1 669 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 SRPK1Q96SB4 655 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 FOXQ1Q9C009 403 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 C10orf88Q9H8K7 445 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 NOD2Q9HC29 1040 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 POLMQ9NP87 494 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 IL36AQ9UHA7 158 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 UTP11Q9Y3A2 253 aaKnown RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 PPIL1Q9Y3C6 166 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 MTF2Q9Y483 593 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 WASF2Q9Y6W5 498 aa19.97■□□□□ 0.79
SCAMP3-209ENST00000497470 TECTAO75443 2155 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 EFCAB8A8MWE9 144 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 C1QTNF3-AMACRE9PGA6 284 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 TRAFD1O14545 582 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 FZD6O60353 706 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 ADH1BP00325 375 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 TPSB2P20231 275 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 NFKBIAP25963 317 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 IVDP26440 423 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 SEC13P55735 322 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 POLR2LP62875 67 aaKnown RBP19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 BCL2L1Q07817 233 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 TPSAB1Q15661 275 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 DUPD1Q68J44 220 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 CWF19L1Q69YN2 538 aaKnown RBP19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 B4GALNT4Q76KP1 1039 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 LINC00523Q86TU6 105 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 HOOK3Q86VS8 718 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 LRRN4Q8WUT4 740 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 FAM131CQ96AQ9 280 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 PPP1R16AQ96I34 528 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 FEM1CQ96JP0 617 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 TM6SF2Q9BZW4 377 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 SUV39H2Q9H5I1 410 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 LRRC40Q9H9A6 602 aa19.96■□□□□ 0.79
SCAMP3-209ENST00000497470 LOC285095A0A1B0GVY8 99 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 TTI1O43156 1089 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 RAD51CO43502 376 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 METTL18O95568 372 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 AP2A1O95782 977 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 ITIH2P19823 946 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 C5AR1P21730 350 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 NUBP1P53384 320 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 DSC2Q02487 901 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 ITKQ08881 620 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 ZNF776Q68DI1 518 aaPredicted RBP19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 KDELC1Q6UW63 502 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 EIF1ADQ8N9N8 165 aaKnown RBP19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 GLIS1Q8NBF1 620 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 MCUQ8NE86 351 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 C19orf43Q9BQ61 176 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 TNKS2Q9H2K2 1166 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 ETNK1Q9HBU6 452 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 RAB6BQ9NRW1 208 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 WHRNQ9P202 907 aa19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 EVLQ9UI08 416 aaPredicted RBP19.95■□□□□ 0.78
SCAMP3-209ENST00000497470 CCDC163A0A0D9SF12 145 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 ALDH1A2O94788 518 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 HLA-EP13747 358 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 HLA-DPA1P20036 260 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 PSMB4P28070 264 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 CCR3P51677 355 aa19.94■□□□□ 0.78
SCAMP3-209ENST00000497470 COPAP53621 1224 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms