RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	KIF19	Q2TAC6	998 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	HNRNPA1L2	Q32P51	320 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PLEKHG6	Q3KR16	790 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	DPCR1	Q3MIW9	517 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	C5orf22	Q49AR2	442 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	CCDC40	Q4G0X9	1142 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	FNDC3B	Q53EP0	1204 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	MPP7	Q5T2T1	576 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	FBXL19	Q6PCT2	694 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	C22orf34	Q6ZV56	151 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	TADA2B	Q86TJ2	420 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PASD1	Q8IV76	773 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	DHX40	Q8IX18	779 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	AHI1	Q8N157	1196 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PNPLA1	Q8N8W4	532 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	HJURP	Q8NCD3	748 aa	Predicted RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	CCDC150	Q8NCX0	1101 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	C1orf131	Q8NDD1	294 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	CADM4	Q8NFZ8	388 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	DNAJB8	Q8NHS0	232 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	FIBIN	Q8TAL6	211 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	CEP76	Q8TAP6	659 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ZNF606	Q8WXB4	792 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ASB11	Q8WXH4	323 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ADAMTS14	Q8WXS8	1223 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PTPRN2	Q92932	1015 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	NAA15	Q9BXJ9	866 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	SRRT	Q9BXP5	876 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PABPC3	Q9H361	631 aa	Known RBP	5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ATP13A1	Q9HD20	1204 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	PLCB1	Q9NQ66	1216 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	SEMA3G	Q9NS98	782 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	HESX1	Q9UBX0	185 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	REV1	Q9UBZ9	1251 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	KLHL3	Q9UH77	587 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	SLCO3A1	Q9UIG8	710 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	GGT7	Q9UJ14	662 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	SARDH	Q9UL12	918 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	KIAA1257	Q9ULG3	409 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	STRIP2	Q9ULQ0	834 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ERVW-1	Q9UQF0	538 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	MSRB2	Q9Y3D2	182 aa		5.68	□□□□□ -1.5
UBE3C-208	ENST00000497368	ACACA	Q13085	2346 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	MEI4	A8MW99	385 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368		H3BS24	57 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	BCAT2	O15382	392 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	DNAJA2	O60884	412 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	OPHN1	O60890	802 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ZNF821	O75541	412 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	DAB1	O75553	588 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	GRAP2	O75791	330 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CNTN5	O94779	1100 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	FBXO21	O94952	628 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	LETM1	O95202	739 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	HTR3B	O95264	441 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ADCY5	O95622	1261 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	SEMA4F	O95754	770 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	TRUB2	O95900	331 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CTSL	P07711	333 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ATXN1L	P0C7T5	689 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ZNF883	P0CG24	379 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CDH5	P33151	784 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	EIF4A3	P38919	411 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	DPP6	P42658	865 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	HARS2	P49590	506 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CSNK1E	P49674	416 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	KLK7	P49862	253 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ADPRH	P54922	357 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	TAS2R38	P59533	333 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ZNF445	P59923	1031 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	YWHAE	P62258	255 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	NUCB2	P80303	420 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	IL9R	Q01113	521 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	GFPT1	Q06210	699 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	BYSL	Q13895	437 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	MPP2	Q14168	576 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	STARD3	Q14849	445 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CST6	Q15828	149 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	HLA-B	Q31612	363 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	PREPL	Q4J6C6	727 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ALF	Q53S48	1182 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	C2CD6	Q53TS8	623 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	TMEM201	Q5SNT2	666 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	AGBL4	Q5VU57	503 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	NUGGC	Q68CJ6	796 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	FBXL22	Q6P050	247 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	KDM7A	Q6ZMT4	941 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	REC114	Q7Z4M0	266 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	SLC47A2	Q86VL8	602 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	SPATS2	Q86XZ4	545 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	MFN1	Q8IWA4	741 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	LGI2	Q8N0V4	545 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	DEFB106A	Q8N104	65 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	CCAR2	Q8N163	923 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	LRRN4CL	Q8ND94	238 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	RNF139	Q8WU17	664 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	PRCC	Q92733	491 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	NT5C3B	Q969T7	300 aa		5.67	□□□□□ -1.5
UBE3C-208	ENST00000497368	TMA16	Q96EY4	203 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms