RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ID2Q02363 134 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 GOLGA8DPQ0D2H9 430 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 ME3Q16798 604 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 TBC1D9BQ66K14 1250 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SLC46A3Q7Z3Q1 461 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 ZDHHC23Q8IYP9 409 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 NANOGP1Q8N7R0 232 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 C16orf52Q8NHV5 167 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 KCNG4Q8TDN1 519 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SMARCE1Q969G3 411 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 FAM149B1Q96BN6 582 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 LBHD1Q9BQE6 289 aaPredicted RBP4.26□□□□□ -1.73
SMC4-225ENST00000497203 SDF4Q9BRK5 362 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SCNM1Q9BWG6 230 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 CXorf56Q9H5V9 222 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SYNCQ9H7C4 482 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 PCDHB16Q9NRJ7 776 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SNTG1Q9NSN8 517 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 TMEM45AQ9NWC5 275 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 EHD2Q9NZN4 543 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 CDH22Q9UJ99 828 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 UTS2RQ9UKP6 389 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 AGO2Q9UKV8 859 aaKnown RBP4.26□□□□□ -1.73
SMC4-225ENST00000497203 PSAT1Q9Y617 370 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 SLC4A4Q9Y6R1 1079 aa4.26□□□□□ -1.73
SMC4-225ENST00000497203 A0A096LPK6 155 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 TRBV5-7A0A0A0MS05 114 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 TLR2O60603 784 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PTP4A3O75365 173 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 FGBP02675 491 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PCNAP12004 261 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 SLC2A4P14672 509 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 ALOX12P18054 663 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 CDH2P19022 906 aaPredicted RBP4.25□□□□□ -1.73
SMC4-225ENST00000497203 MLH1P40692 756 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 RGS2P41220 211 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 DPP6P42658 865 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 OLR1P78380 273 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 VEPH1Q14D04 833 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
SMC4-225ENST00000497203 MEA1Q16626 185 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 HIST2H2ACQ16777 129 aaPredicted RBP4.25□□□□□ -1.73
SMC4-225ENST00000497203 MIDNQ504T8 468 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 MOB3CQ70IA8 216 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 GSTA5Q7RTV2 222 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 KDELC2Q7Z4H8 507 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PIP4P1Q86T03 277 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 GPAT4Q86UL3 456 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 SLC25A41Q8N5S1 370 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PDILTQ8N807 584 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 SLC44A5Q8NCS7 719 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 CADM4Q8NFZ8 388 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PIGOQ8TEQ8 1089 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 CREB3L4Q8TEY5 395 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 ZNF419Q96HQ0 510 aaPredicted RBP4.25□□□□□ -1.73
SMC4-225ENST00000497203 ZNF333Q96JL9 665 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 MAP7D2Q96T17 732 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PIP5K1AQ99755 562 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 ITPAQ9BY32 194 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 CCDC68Q9H2F9 335 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PNRC2Q9NPJ4 139 aaKnown RBP4.25□□□□□ -1.73
SMC4-225ENST00000497203 HCFC1R1Q9NWW0 138 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 NCKIPSDQ9NZQ3 722 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 A4GNTQ9UNA3 340 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 PIAS3Q9Y6X2 628 aa4.25□□□□□ -1.73
SMC4-225ENST00000497203 TRBV5-3A0A0A0MS03 114 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 EIF3CLB5ME19 914 aaKnown RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 TAF4O00268 1085 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 EBAG9O00559 213 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 AP3D1O14617 1153 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 LDLRAD4O15165 306 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 DOK2O60496 412 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 GFPT2O94808 682 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 HEXAP06865 529 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 MMP3P08254 477 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 HOXB5P09067 269 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 UNGP13051 313 aaPredicted RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 PRF1P14222 555 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 CENPAP49450 140 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 DPCR1Q3MIW9 517 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 SYTL3Q4VX76 610 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 ENTPD8Q5MY95 495 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 FAM205BPQ63HN1 556 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 TXNDC8Q6A555 127 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 CPLX2Q6PUV4 134 aaKnown RBP4.24□□□□□ -1.73
SMC4-225ENST00000497203 SERPINA11Q86U17 422 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 NME8Q8N427 588 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 NRACQ8N912 160 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 CCDC89Q8N998 374 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 OR4N2Q8NGD1 307 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 POMGNT1Q8WZA1 660 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 USP6NLQ92738 828 aa4.24□□□□□ -1.73
SMC4-225ENST00000497203 ARHGEF2Q92974 986 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms