RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ELOVL5Q9NYP7 299 aa5.05□□□□□ -1.6
VPS36-206ENST00000497149 ORC3Q9UBD5 711 aaPredicted RBP5.05□□□□□ -1.6
VPS36-206ENST00000497149 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 LDLRAD4O15165 306 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 TGFB1I1O43294 461 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 MOSPD3O75425 235 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 MMP3P08254 477 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 CHRNB2P17787 502 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 TNFRSF1BP20333 461 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 POU1F1P28069 291 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 PTGER1P34995 402 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 CPOXP36551 454 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 PPP3CCP48454 512 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 RASSF2P50749 326 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 EFNA5P52803 228 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 EIF3BP55884 814 aaKnown RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 KRT32Q14532 448 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 PLEKHO1Q53GL0 409 aaPredicted RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 EPHA10Q5JZY3 1008 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 WASHC2DQ5SRD0 308 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 HAUS3Q68CZ6 603 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 TMTC3Q6ZXV5 915 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 TBC1D26Q86UD7 250 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 NRACQ8N912 160 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 ENGASEQ8NFI3 743 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 SLC25A28Q96A46 364 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 RNF183Q96D59 192 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 YME1L1Q96TA2 773 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 POLDIP3Q9BY77 421 aaKnown RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 SLC29A3Q9BZD2 475 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 LHPPQ9H008 270 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 FOXP1Q9H334 677 aaPredicted RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 SIRT3Q9NTG7 399 aaPredicted RBP5.04□□□□□ -1.6
VPS36-206ENST00000497149 ZBTB40Q9NUA8 1239 aa5.04□□□□□ -1.6
VPS36-206ENST00000497149 NPIPB15A6NHN6 443 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 SOCS2O14508 198 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 USO1O60763 962 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 CLDN7O95471 211 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 HSPA1AP0DMV8 641 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 HSPA1BP0DMV9 641 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 ZNF8P17098 575 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 EDN2P20800 178 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 RGS2P41220 211 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CTCFP49711 727 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 CDH12P55289 794 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CLDN2P57739 230 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 KRTAP1-1Q07627 177 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 DCTN2Q13561 401 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 PTGR1Q14914 329 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 VEPH1Q14D04 833 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 TBCEQ15813 527 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 DUSP6Q16828 381 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 HYIQ5T013 277 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 TXNDC8Q6A555 127 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CPLX2Q6PUV4 134 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 CPLX4Q7Z7G2 160 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 LURAP1LQ8IV03 231 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 KIAA2013Q8IYS2 634 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CNTROBQ8N137 903 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 TEX45Q8NA69 505 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 GABPB2Q8TAK5 448 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 NLRP4Q96MN2 994 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 ZNF778Q96MU6 729 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 GLIS2Q9BZE0 524 aaPredicted RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 ISCUQ9H1K1 167 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 CDT1Q9H211 546 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 RANBP17Q9H2T7 1088 aaKnown RBP5.03□□□□□ -1.6
VPS36-206ENST00000497149 BRF2Q9HAW0 419 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 POT1Q9NUX5 634 aa5.03□□□□□ -1.6
VPS36-206ENST00000497149 RUSC2Q8N2Y8 1516 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TYW5A2RUC4 315 aaKnown RBP5.02□□□□□ -1.61
VPS36-206ENST00000497149 KLRF2D3W0D1 207 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TAF4O00268 1085 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 DDX58O95786 925 aaKnown RBP5.02□□□□□ -1.61
VPS36-206ENST00000497149 CLEC3BP05452 202 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 PCNAP12004 261 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 SRD5A1P18405 259 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CHMP24386 653 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TBXAS1P24557 533 aaPredicted RBP5.02□□□□□ -1.61
VPS36-206ENST00000497149 ICAM3P32942 547 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 NR4A2P43354 598 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CXCR3P49682 368 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 PLCD1P51178 756 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 ZNF81P51508 661 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CLCN5P51795 746 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 SELENOVP59797 346 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 CAPSQ13938 189 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 RUNX2Q13950 521 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 LPIN1Q14693 890 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 TWIST1Q15672 202 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 GSTA3Q16772 222 aa5.02□□□□□ -1.61
VPS36-206ENST00000497149 HIST2H2ACQ16777 129 aaPredicted RBP5.02□□□□□ -1.61
VPS36-206ENST00000497149 GPATCH4Q5T3I0 446 aaKnown RBP5.02□□□□□ -1.61
VPS36-206ENST00000497149 ZNF425Q6IV72 752 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms