RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 A0A1W2PPC4 97 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 PLK4O00444 970 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 AP1G1O43747 822 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 NEBLO76041 1014 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ZRANB2O95218 330 aaKnown RBP eCLIP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 IGHV4-34P06331 123 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ADRB3P13945 408 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 MAOBP27338 520 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ATXN3P54252 364 aaPredicted RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 AP1S1P61966 158 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 SLC9A4Q6AI14 798 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ARHGAP36Q6ZRI8 547 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 BZW1Q7L1Q6 419 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 RFX6Q8HWS3 928 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 KATNAL2Q8IYT4 538 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ZCCHC9Q8N567 271 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 PQLC3Q8N755 202 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 NETO2Q8NC67 525 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 TSEN2Q8NCE0 465 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 FATE1Q969F0 183 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 RNF25Q96BH1 459 aaPredicted RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 EXOC2Q96KP1 924 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 ZNF641Q96N77 438 aaPredicted RBP19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 KLHL32Q96NJ5 620 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 LACRTQ9GZZ8 138 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 DKK3Q9UBP4 350 aa19.5■□□□□ 0.71
CTDSP1-213ENST00000496785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 LNP1A1A4G5 178 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 CCDC66A2RUB6 948 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 C3orf70A6NLC5 250 aaPredicted RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 C16orf96A6NNT2 1141 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 PATE3B3GLJ2 98 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 LATO43561 262 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 KRT86O43790 486 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 XPAP23025 273 aaPredicted RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 CCNCP24863 283 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 SERPINA4P29622 427 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 CETN2P41208 172 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 LIMK1P53667 647 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 IRX4P78413 519 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 HNRNPDQ14103 355 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 SETMARQ53H47 684 aaPredicted RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 SLC45A4Q5BKX6 768 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 RALGPS1Q5JS13 557 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 TCEAL6Q6IPX3 200 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 PARS2Q7L3T8 475 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 SRLQ86TD4 932 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 TP53INP2Q8IXH6 220 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 RCOR2Q8IZ40 523 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 PAF1Q8N7H5 531 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 EXD1Q8NHP7 514 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 TCEAL3Q969E4 200 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 HDAC11Q96DB2 347 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 TSGA13Q96PP4 275 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 DESI2Q9BSY9 194 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 CAPN10Q9HC96 672 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 AMACRQ9UHK6 382 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 SALL4Q9UJQ4 1053 aa19.49■□□□□ 0.71
CTDSP1-213ENST00000496785 USP34Q70CQ2 3546 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 A0A1W2PQ67 120 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 PPP1R12AO14974 1030 aaPredicted RBP19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 TSPAN6O43657 245 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 PCDH8O95206 1070 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 GKP32189 559 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 MMP13P45452 471 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 GRIA4P48058 902 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 TAS2R38P59533 333 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 RACK1P63244 317 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 BCL2L1Q07817 233 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 SLC10A7Q0GE19 358 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 TFDP3Q5H9I0 405 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 KIAA1161Q6NSJ0 714 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 BRAT1Q6PJG6 821 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 ADAT2Q7Z6V5 191 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 CCDC50Q8IVM0 306 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 LRRC8AQ8IWT6 810 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 RNF10Q8N5U6 811 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 UBE2Q2Q8WVN8 375 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 FEM1CQ96JP0 617 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 BRD8Q9H0E9 1235 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 GOLPH3Q9H4A6 298 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 SUV39H2Q9H5I1 410 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 TMEM9BQ9NQ34 198 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 DTLQ9NZJ0 730 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 DUSP10Q9Y6W6 482 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 NUMA1Q14980 2115 aa19.48■□□□□ 0.71
CTDSP1-213ENST00000496785 MACROD2A1Z1Q3 448 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 C10orf142B7Z368 130 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 NEMP1O14524 444 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 ARHGAP33O14559 1287 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 MATN3O15232 486 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 RNGTTO60942 597 aaKnown RBP19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 ENGP17813 658 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 CTNNA1P35221 906 aaKnown RBP19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 NR2C2P49116 596 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 SCNN1BP51168 640 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 COPS2P61201 443 aa19.47■□□□□ 0.71
CTDSP1-213ENST00000496785 PPP2CBP62714 309 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms