RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 PI4KAP42356 2102 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 C3orf70A6NLC5 250 aaPredicted RBP23.02■■□□□ 1.28
CHRD-217ENST00000496527 C10orf142B7Z368 130 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 INSIG1O15503 277 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 CSNK1DP48730 415 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 LIMK1P53667 647 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 ATXN3P54252 364 aaPredicted RBP23.02■■□□□ 1.28
CHRD-217ENST00000496527 NSUN2Q08J23 767 aaKnown RBP eCLIP23.02■■□□□ 1.28
CHRD-217ENST00000496527 SLC10A7Q0GE19 358 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 GALNT2Q10471 571 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 ZNF235Q14590 738 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 STPG1Q5TH74 334 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 NEK5Q6P3R8 708 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 SRLQ86TD4 932 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 TRIM69Q86WT6 500 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 BBS5Q8N3I7 341 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 RMDN1Q96DB5 314 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 DESI2Q9BSY9 194 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 TM9SF3Q9HD45 589 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 TMEM9BQ9NQ34 198 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 FSCN3Q9NQT6 498 aa23.02■■□□□ 1.28
CHRD-217ENST00000496527 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.02■■□□□ 1.28
CHRD-217ENST00000496527 ARHGAP33O14559 1287 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 RNGTTO60942 597 aaKnown RBP23.01■■□□□ 1.27
CHRD-217ENST00000496527 PCDH8O95206 1070 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 MAT2AP31153 395 aaKnown RBP23.01■■□□□ 1.27
CHRD-217ENST00000496527 GARSP41250 739 aaKnown RBP23.01■■□□□ 1.27
CHRD-217ENST00000496527 ID4P47928 161 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 AFF3P51826 1226 aaKnown RBP23.01■■□□□ 1.27
CHRD-217ENST00000496527 KIF5AQ12840 1032 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 TEAD4Q15561 434 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 RAB7BQ96AH8 199 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 VOPP1Q96AW1 172 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 PSKH2Q96QS6 385 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 ORAI3Q9BRQ5 295 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 GTPBP2Q9BX10 602 aaKnown RBP23.01■■□□□ 1.27
CHRD-217ENST00000496527 EBF2Q9HAK2 575 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 GRPEL1Q9HAV7 217 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 SLCO1B1Q9Y6L6 691 aa23.01■■□□□ 1.27
CHRD-217ENST00000496527 GOLGA6L3A6NEY3 463 aa23■■□□□ 1.27
CHRD-217ENST00000496527 LATO43561 262 aa23■■□□□ 1.27
CHRD-217ENST00000496527 MAP3K6O95382 1288 aa23■■□□□ 1.27
CHRD-217ENST00000496527 PIGNO95427 931 aa23■■□□□ 1.27
CHRD-217ENST00000496527 PEX11BO96011 259 aa23■■□□□ 1.27
CHRD-217ENST00000496527 MX2P20592 715 aa23■■□□□ 1.27
CHRD-217ENST00000496527 NUDT1P36639 197 aa23■■□□□ 1.27
CHRD-217ENST00000496527 HSPA9P38646 679 aaKnown RBP23■■□□□ 1.27
CHRD-217ENST00000496527 MAPK8P45983 427 aa23■■□□□ 1.27
CHRD-217ENST00000496527 RGRP47804 291 aa23■■□□□ 1.27
CHRD-217ENST00000496527 RACK1P63244 317 aaKnown RBP23■■□□□ 1.27
CHRD-217ENST00000496527 GBE1Q04446 702 aa23■■□□□ 1.27
CHRD-217ENST00000496527 IFI16Q16666 785 aaKnown RBP23■■□□□ 1.27
CHRD-217ENST00000496527 MARC1Q5VT66 337 aa23■■□□□ 1.27
CHRD-217ENST00000496527 TIGD7Q6NT04 549 aaPredicted RBP23■■□□□ 1.27
CHRD-217ENST00000496527 RFX6Q8HWS3 928 aa23■■□□□ 1.27
CHRD-217ENST00000496527 ZNF830Q96NB3 372 aaPredicted RBP23■■□□□ 1.27
CHRD-217ENST00000496527 TUBGCP5Q96RT8 1024 aa23■■□□□ 1.27
CHRD-217ENST00000496527 DKK3Q9UBP4 350 aa23■■□□□ 1.27
CHRD-217ENST00000496527 FADS3Q9Y5Q0 445 aa23■■□□□ 1.27
CHRD-217ENST00000496527 CFAP54Q96N23 3096 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 A0A1W2PQU0 124 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 C4orf47A7E2U8 309 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 APOL1O14791 398 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 SLC30A4O14863 429 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 AP1G1O43747 822 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 ZFXP17010 805 aaPredicted RBP22.99■■□□□ 1.27
CHRD-217ENST00000496527 CSNK1EP49674 416 aaKnown RBP22.99■■□□□ 1.27
CHRD-217ENST00000496527 SCNN1BP51168 640 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 PUM1Q14671 1186 aaKnown RBP eCLIP22.99■■□□□ 1.27
CHRD-217ENST00000496527 SETMARQ53H47 684 aaPredicted RBP22.99■■□□□ 1.27
CHRD-217ENST00000496527 CFAP58Q5T655 872 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 SLC9A4Q6AI14 798 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 MFSD7Q6UXD7 560 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 ADAT2Q7Z6V5 191 aaKnown RBP22.99■■□□□ 1.27
CHRD-217ENST00000496527 TTC7BQ86TV6 843 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 HORMAD1Q86X24 394 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 CCDC112Q8NEF3 446 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 KIAA1524Q8TCG1 905 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 HCAR2Q8TDS4 363 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 FEM1CQ96JP0 617 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 SERAC1Q96JX3 654 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 ZNF641Q96N77 438 aaPredicted RBP22.99■■□□□ 1.27
CHRD-217ENST00000496527 RTKNQ9BST9 563 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 ZDHHC5Q9C0B5 715 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 SUV39H2Q9H5I1 410 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 ATP13A3Q9H7F0 1226 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 AASDHPPTQ9NRN7 309 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 DLL3Q9NYJ7 618 aa22.99■■□□□ 1.27
CHRD-217ENST00000496527 NEMP1O14524 444 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 CDX4O14627 284 aaPredicted RBP22.98■■□□□ 1.27
CHRD-217ENST00000496527 MUSKO15146 869 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 ZRANB2O95218 330 aaKnown RBP eCLIP22.98■■□□□ 1.27
CHRD-217ENST00000496527 XPAP23025 273 aaPredicted RBP22.98■■□□□ 1.27
CHRD-217ENST00000496527 CCNCP24863 283 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 SERPINA4P29622 427 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 ABL2P42684 1182 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 MMP13P45452 471 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 GRIA4P48058 902 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 AP1S1P61966 158 aa22.98■■□□□ 1.27
CHRD-217ENST00000496527 SLC10A2Q12908 348 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms