RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NSUN2Q08J23 767 aaKnown RBP eCLIP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 DPYSL3Q14195 570 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TEAD4Q15561 434 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 POM121L1PQ3SYA9 428 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ATP13A4Q4VNC1 1196 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ZNF805Q5CZA5 627 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 FBXL19Q6PCT2 694 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 IL27RAQ6UWB1 636 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 PRPF39Q86UA1 669 aaKnown RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TRIM69Q86WT6 500 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 VSIG1Q86XK7 387 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ZCCHC9Q8N567 271 aaKnown RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 HCAR2Q8TDS4 363 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ARRDC3Q96B67 414 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TM9SF3Q9HD45 589 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 IPO11Q9UI26 975 aaKnown RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 DMTF1Q9Y222 760 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 THADAQ6YHU6 1953 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 C4orf47A7E2U8 309 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ZNF487B1APH4 448 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 RNF103O00237 685 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 PLK4O00444 970 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 AP1G1O43747 822 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 CD48P09326 243 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ADRB3P13945 408 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 GRIA4P48058 902 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 RENBPP51606 427 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 SUOXP51687 545 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ATXN7L2Q5T6C5 722 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-233ENST00000495899 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ERMP1Q7Z2K6 904 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ZSCAN30Q86W11 494 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 RHOT1Q8IXI2 618 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 VOPP1Q96AW1 172 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 SKA1Q96BD8 255 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 FAF2Q96CS3 445 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ZNF641Q96N77 438 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-233ENST00000495899 PSKH2Q96QS6 385 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 SP110Q9HB58 689 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 ETNK2Q9NVF9 386 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 LHX3Q9UBR4 397 aa12.54□□□□□ -0.4
MRPL55-233ENST00000495899 SDK1Q7Z5N4 2213 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 UPK3BL1B0FP48 263 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 VILLO15195 856 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 TSPAN6O43657 245 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 MAFKO60675 156 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 RNGTTO60942 597 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 KDELR1P24390 212 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 MAPK8P45983 427 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 NOP2P46087 812 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 CSNK1EP49674 416 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 SLC14A1Q13336 389 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 SETMARQ53H47 684 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 DGLUCYQ7Z3D6 616 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 PCDH19Q8TAB3 1148 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 FEM1CQ96JP0 617 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 BAG1Q99933 345 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 CINPQ9BW66 212 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 GTPBP2Q9BX10 602 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 EBF2Q9HAK2 575 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
MRPL55-233ENST00000495899 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
MRPL55-233ENST00000495899 C16orf96A6NNT2 1141 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 PRAMEF26H0Y7S4 382 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 DFNA5O60443 496 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 BUB1BO60566 1050 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-233ENST00000495899 OPHN1O60890 802 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 PEX11BO96011 259 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 UGT2B4P06133 528 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 COMTP21964 271 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 GKP32189 559 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 GJC1P36383 396 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
MRPL55-233ENST00000495899 PPP2CBP62714 309 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 RPS21P63220 83 aaKnown RBP12.52□□□□□ -0.41
MRPL55-233ENST00000495899 PPP2CAP67775 309 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 GALNT2Q10471 571 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 OVGP1Q12889 678 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 GRIK2Q13002 908 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
MRPL55-233ENST00000495899 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 ZFYVE27Q5T4F4 411 aa12.52□□□□□ -0.41
MRPL55-233ENST00000495899 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms