RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 APOBEC3BQ9UH17 382 aaKnown RBP17.84■□□□□ 0.45
TMEM53-209ENST00000495630 FCF1Q9Y324 198 aaKnown RBP17.84■□□□□ 0.45
TMEM53-209ENST00000495630 TMX2-CTNND1H3BSU7 103 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 FOXN3O00409 490 aaPredicted RBP17.83■□□□□ 0.44
TMEM53-209ENST00000495630 BIN1O00499 593 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 YY2O15391 372 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 SLC28A2O43868 658 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 POP4O95707 220 aaKnown RBP17.83■□□□□ 0.44
TMEM53-209ENST00000495630 CD160O95971 181 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 C1orf61Q13536 156 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 SPIDRQ14159 915 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 FAXCQ5TGI0 409 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 CREBRFQ8IUR6 639 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 CCDC3Q9BQI4 270 aa17.83■□□□□ 0.44
TMEM53-209ENST00000495630 TCEAL2Q9H3H9 227 aaPredicted RBP17.83■□□□□ 0.44
TMEM53-209ENST00000495630 PMS2P1A4D2B8 440 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 NTN3O00634 580 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 EFSO43281 561 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 CDH5P33151 784 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 ABL2P42684 1182 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 GEMIN4P57678 1058 aaKnown RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 DRAP1Q14919 205 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 POLD3Q15054 466 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 MYLK3Q32MK0 819 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 ZSCAN23Q3MJ62 389 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 LVRNQ6Q4G3 990 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 BNIPLQ7Z465 357 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 TTC7BQ86TV6 843 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 RBFAQ8N0V3 343 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 RYBPQ8N488 228 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 LIN37Q96GY3 246 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 OSBPL1AQ9BXW6 950 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 TM6SF2Q9BZW4 377 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 DNAJC12Q9UKB3 198 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 ATXN7L1Q9ULK2 861 aaPredicted RBP17.82■□□□□ 0.44
TMEM53-209ENST00000495630 PCDHGA7Q9Y5G6 932 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 MYO18BQ8IUG5 2567 aa17.82■□□□□ 0.44
TMEM53-209ENST00000495630 PLD2O14939 933 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 AREL1O15033 823 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 ARHGAP6O43182 974 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 GJB6O95452 261 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 TSHRP16473 764 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 BLKP51451 505 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 SNRPD1P62314 119 aaKnown RBP17.81■□□□□ 0.44
TMEM53-209ENST00000495630 PPARDQ03181 441 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 EIF3IQ13347 325 aaKnown RBP17.81■□□□□ 0.44
TMEM53-209ENST00000495630 FAM102AQ5T9C2 384 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-209ENST00000495630 ARCQ7LC44 396 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 XYLT1Q86Y38 959 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 DRC7Q8IY82 874 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 FAM71AQ8IYT1 594 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 SDR16C5Q8N3Y7 309 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 SCG3Q8WXD2 468 aaKnown RBP17.81■□□□□ 0.44
TMEM53-209ENST00000495630 LRRC61Q9BV99 259 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 C1QTNF7Q9BXJ2 289 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 CLPBQ9H078 707 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 PDCL3Q9H2J4 239 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 GGT7Q9UJ14 662 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 PNMA8BQ9ULN7 279 aaPredicted RBP17.81■□□□□ 0.44
TMEM53-209ENST00000495630 HPCAL4Q9UM19 191 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 ACTL7AQ9Y615 435 aa17.81■□□□□ 0.44
TMEM53-209ENST00000495630 KRIT1O00522 736 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 TM7SF2O76062 418 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 GSRP00390 522 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 GKP32189 559 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 ACVRL1P37023 503 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 EIF4A3P38919 411 aaKnown RBP17.8■□□□□ 0.44
TMEM53-209ENST00000495630 CSRP3P50461 194 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 PEX5P50542 639 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 PDX1P52945 283 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 MACC1Q6ZN28 852 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 FSTL5Q8N475 847 aaPredicted RBP17.8■□□□□ 0.44
TMEM53-209ENST00000495630 FBXO39Q8N4B4 442 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 OR2AP1Q8NGE2 309 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
TMEM53-209ENST00000495630 VOPP1Q96AW1 172 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 STRADBQ9C0K7 418 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 GULP1Q9UBP9 304 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 TMEM59LQ9UK28 342 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 ACSL6Q9UKU0 697 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 DOLKQ9UPQ8 538 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 ITM2BQ9Y287 266 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 PIEZO2Q9H5I5 2752 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 RP1P56715 2156 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 MAST4O15021 2626 aa17.8■□□□□ 0.44
TMEM53-209ENST00000495630 CYSRT1A8MQ03 144 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 TMEM110-MUSTN1A8MSY1 372 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 PYCARD-AS1I3L0S3 204 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 SLC5A2P31639 672 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 IGFALSP35858 605 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 FLT3P36888 993 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 NRG1Q02297 640 aaPredicted RBP17.79■□□□□ 0.44
TMEM53-209ENST00000495630 ELOCQ15369 112 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 GDPD4Q6W3E5 623 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 RAB11FIP2Q7L804 512 aa17.79■□□□□ 0.44
TMEM53-209ENST00000495630 VPS36Q86VN1 386 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms