RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 LIMK2P53671 638 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 NRG1Q02297 640 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 SLC10A7Q0GE19 358 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 FASTKQ14296 549 aaKnown RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 RBBP7Q16576 425 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 STRADAQ7RTN6 431 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 NET1Q7Z628 596 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 ST13P5Q8NFI4 369 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 PSMG2Q969U7 264 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PLK2Q9NYY3 685 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 LRRC42Q9Y546 428 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 SHROOM3Q8TF72 1996 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 A0A1W2PQ67 120 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 UBDO15205 165 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 DLX3O60479 287 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 DHRS4L1P0CG22 281 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 VCLP18206 1134 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PAMP19021 973 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 TRIM32Q13049 653 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 KYAT1Q16773 422 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 ZIK1Q3SY52 487 aaPredicted RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 UTS2BQ765I0 119 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 CCDC97Q96F63 343 aaPredicted RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 CCDC106Q9BWC9 280 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 EFCAB1Q9HAE3 211 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 MOCS1Q9NZB8 636 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 LNPEPQ9UIQ6 1025 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 URB1O60287 2271 aaKnown RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 GPR39O43194 453 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 SLC5A3P53794 718 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 CDH15P55291 814 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 ZRANB3Q5FWF4 1079 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 MARC1Q5VT66 337 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 MPP4Q96JB8 637 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 HCSTQ9UBK5 93 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PDLIM1O00151 329 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PFDN1O60925 122 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 TGDSO95455 350 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 NR4A1P22736 598 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 HADHAP40939 763 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 VPS26BQ4G0F5 336 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
GPC1-209ENST00000495100 MIPOL1Q8TD10 442 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 SEMA3CQ99985 751 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 SYT17Q9BSW7 474 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 ZNF180Q9UJW8 692 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PADI3Q9ULW8 664 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PCDHGB4Q9UN71 923 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PCDHGB5Q9Y5G0 923 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
GPC1-209ENST00000495100 RHOBTB1O94844 696 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 CLPTM1O96005 669 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 SLC7A2P52569 658 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
GPC1-209ENST00000495100 FAM171A1Q5VUB5 890 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 PAQR9Q6ZVX9 377 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 LRRTM3Q86VH5 581 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 AFAP1L2Q8N4X5 818 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 MAB21L3Q8N8X9 362 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 CXorf38Q8TB03 319 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 FBXO32Q969P5 355 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 SORT1Q99523 831 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 NAT9Q9BTE0 207 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 SOX17Q9H6I2 414 aaPredicted RBP13.58□□□□□ -0.24
GPC1-209ENST00000495100 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 NCK1P16333 377 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 KCNA5P22460 613 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 PSEN1P49768 467 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 KRT72Q14CN4 511 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 ZNF792Q3KQV3 632 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 NOL9Q5SY16 702 aaKnown RBP13.58□□□□□ -0.24
GPC1-209ENST00000495100 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 OR13C4Q8NGS5 318 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 MTFMTQ96DP5 389 aaKnown RBP13.58□□□□□ -0.24
GPC1-209ENST00000495100 TM6SF2Q9BZW4 377 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 IL22Q9GZX6 179 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 ADAMTS10Q9H324 1103 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
GPC1-209ENST00000495100 ARL5AQ9Y689 179 aa13.58□□□□□ -0.24
GPC1-209ENST00000495100 DNAJC25-GNG10A0A024R161 153 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 E5RI56 91 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 INPP4BO15327 924 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 GPR32O75388 356 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 DAB1O75553 588 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 ODC1P11926 461 aa13.57□□□□□ -0.24
GPC1-209ENST00000495100 CREB5Q02930 508 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms