RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	SENP8	Q96LD8	212 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MRPL40	Q9NQ50	206 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CNGB3	Q9NQW8	809 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ATXN10	Q9UBB4	475 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SLC2A6	Q9UGQ3	507 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	IPP	Q9Y573	584 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	POLR2A	P24928	1970 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	AP1G1	O43747	822 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PIM1	P11309	404 aa	Predicted RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SLC1A2	P43004	574 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FRG1	Q14331	258 aa	Known RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FAM83E	Q2M2I3	478 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	INTS6L	Q5JSJ4	861 aa	Known RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KLC3	Q6P597	504 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ARHGAP36	Q6ZRI8	547 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TXNDC5	Q8NBS9	432 aa	Known RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DDI1	Q8WTU0	396 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM40	Q8WWA1	233 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PCED1B	Q96HM7	432 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MRPL57	Q9BQC6	102 aa	Known RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	EFHD1	Q9BUP0	239 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	THEG	Q9P2T0	379 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HEATR9	A2RTY3	570 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PSMD12	O00232	456 aa	Predicted RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SDHD	O14521	159 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HDC	P19113	662 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ATP5F1	P24539	256 aa	Predicted RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HCAR3	P49019	387 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SNX17	Q15036	470 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYLK3	Q32MK0	819 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ZNF792	Q3KQV3	632 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	IL31	Q6EBC2	164 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	EXT2	Q93063	718 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	EML4	Q9HC35	981 aa	Known RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	VPS28	Q9UK41	221 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071		E7ENX8	843 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ARSA	P15289	507 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	IGFBP6	P24592	240 aa	Predicted RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ITK	Q08881	620 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SPNS2	Q8IVW8	549 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	METTL25	Q8N6Q8	603 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SHCBP1	Q8NEM2	672 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ZFP28	Q8NHY6	868 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LRTOMT	Q8WZ04	291 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LENG1	Q96BZ8	264 aa	Predicted RBP	13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CDCA5	Q96FF9	252 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SMO	Q99835	787 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CRTAC1	Q9NQ79	661 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FBXO5	Q9UKT4	447 aa		13.57	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ATP6AP2	A0A1C7CYW4	349 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	VILL	O15195	856 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ATP6AP2	O75787	350 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ASL	P04424	464 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TSPAN8	P19075	237 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DNAJB2	P25686	324 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SCAP	Q12770	1279 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SEMA3B	Q13214	749 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TRIM25	Q14258	630 aa	Known RBP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DUSP28	Q4G0W2	176 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CNST	Q6PJW8	725 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LCA5	Q86VQ0	697 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ZNF354C	Q86Y25	554 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM126B	Q8IUX1	230 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM151A	Q8N4L1	468 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FAM81A	Q8TBF8	368 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM79	Q9BSE2	394 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HAUS8	Q9BT25	410 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RHOBTB2	Q9BYZ6	727 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	EPB41L1	Q9H4G0	881 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	COQ10B	Q9H8M1	238 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ADARB2	Q9NS39	739 aa	Known RBP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KCNH4	Q9UQ05	1017 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DMTF1	Q9Y222	760 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PRSS51	A0A1B0GVH4	220 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMCC1	O94876	653 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SNAI1	O95863	264 aa	Predicted RBP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MOCS2	O96007	188 aa	Predicted RBP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CPB1	P15086	417 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KCNE1	P15382	129 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	AXL	P30530	894 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	NR1H2	P55055	460 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	STX1B	P61266	288 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PRAME	P78395	509 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	NEPRO	Q6NW34	567 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ARRDC4	Q8NCT1	418 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LPGAT1	Q92604	370 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ASB9	Q96DX5	294 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	IL1RL2	Q9HB29	575 aa		13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	5e-6	■■■■■ 31.7
SUPT20H-222	ENST00000495071	TNS1	Q9HBL0	1735 aa	Known RBP	13.56	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MRAS	O14807	208 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HNRNPR	O43390	633 aa	Known RBP	13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	AKAP10	O43572	662 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KIF19	Q2TAC6	998 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM259	Q4ZIN3	620 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	AGAP9	Q5VTM2	703 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KIAA0319	Q5VV43	1072 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYO1H	Q8N1T3	1032 aa		13.55	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RYBP	Q8N488	228 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms