RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 YBEYP58557 167 aaPredicted RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 RHOAP61586 193 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 RPS21P63220 83 aaKnown RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 OVGP1Q12889 678 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 SGCGQ13326 291 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 ZNF805Q5CZA5 627 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 E4F1Q66K89 784 aaPredicted RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 GDPD4Q6W3E5 623 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 KDM7AQ6ZMT4 941 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 GCNT7Q6ZNI0 430 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 KANSL1Q7Z3B3 1105 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 PTAR1Q7Z6K3 402 aaPredicted RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 SLC22A18ASQ8N1D0 253 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 GALNT15Q8N3T1 639 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TMEM145Q8NBT3 493 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 VOPP1Q96AW1 172 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 CELF6Q96J87 481 aaKnown RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 EXOC2Q96KP1 924 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 EPAS1Q99814 870 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TRIM7Q9C029 511 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TTYH3Q9C0H2 523 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 CATSPERBQ9H7T0 1116 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 KLHL11Q9NVR0 708 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 AIPL1Q9NZN9 384 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 CNOT8Q9UFF9 292 aaKnown RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 IPO11Q9UI26 975 aaKnown RBP9.74□□□□□ -0.85
MSH5-218ENST00000494646 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 AP4E1Q9UPM8 1137 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 ACACAQ13085 2346 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 ITPR1Q14643 2758 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 ASXL3Q9C0F0 2248 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 A0A1B0GTH6 734 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 SYCE3A1L190 88 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 TMEM191CA6NGB0 347 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 ZSCAN5CA6NGD5 496 aaPredicted RBP9.73□□□□□ -0.85
MSH5-218ENST00000494646 WASH4PA8MWX3 477 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 DDX3XO00571 662 aaKnown RBP eCLIP9.73□□□□□ -0.85
MSH5-218ENST00000494646 DAPK3O43293 454 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 TSPAN6O43657 245 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 RFPL3O75679 317 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 IGSF6O95976 241 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 GSRP00390 522 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 TIMP2P16035 220 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 CKMT2P17540 419 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 DESP17661 470 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 DGKAP23743 735 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 PAPOLAP51003 745 aaKnown RBP9.73□□□□□ -0.85
MSH5-218ENST00000494646 TPI1P60174 286 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 SEMG2Q02383 582 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 RAD51Q06609 339 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 KLHL30Q0D2K2 578 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 SERINC3Q13530 473 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 SMAD1Q15797 465 aaKnown RBP9.73□□□□□ -0.85
MSH5-218ENST00000494646 INO80DQ53TQ3 878 aaPredicted RBP9.73□□□□□ -0.85
MSH5-218ENST00000494646 ERMARDQ5T6L9 678 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 PLEKHA7Q6IQ23 1121 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 KIAA1161Q6NSJ0 714 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 PROSER1Q86XN7 944 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 TSC1Q92574 1164 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 LRIG1Q96JA1 1093 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 PEBP4Q96S96 227 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
MSH5-218ENST00000494646 FUCA2Q9BTY2 467 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.73□□□□□ -0.85
MSH5-218ENST00000494646 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 SLC39A8Q9C0K1 460 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 CBX8Q9HC52 389 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 DNAJC28Q9NX36 388 aa9.73□□□□□ -0.85
MSH5-218ENST00000494646 PKD1L2Q7Z442 2459 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 CXorf51AA0A1B0GTR3 108 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 A0A1W2PQC6 194 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 A6NNZ2 444 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 EEF2KO00418 725 aaKnown RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 FPGTO14772 594 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 AP1G1O43747 822 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 PIAS2O75928 621 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 NEBLO76041 1014 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 RNF8O76064 485 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 PIGNO95427 931 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 C1SP09871 688 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 GZMAP12544 262 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 MIPP30301 263 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 ACADVLP49748 655 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 AIF1P55008 147 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 DAB2P98082 770 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 FANCCQ00597 558 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 TARDBPQ13148 414 aaKnown RBP eCLIP9.72□□□□□ -0.85
MSH5-218ENST00000494646 PDE1CQ14123 709 aaPredicted RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 PARP15Q460N3 678 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 PPP6R3Q5H9R7 873 aaPredicted RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 TPRG1LQ5T0D9 272 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 ABI3BPQ7Z7G0 1075 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 LUZP1Q86V48 1076 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms