RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 Q6ZSR6 202 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 PTAR1Q7Z6K3 402 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 TSC1Q92574 1164 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 BMFQ96LC9 184 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 EPAS1Q99814 870 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 BPIFA3Q9BQP9 254 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 DUSP23Q9BVJ7 150 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 C1QTNF7Q9BXJ2 289 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 UCKL1Q9NWZ5 548 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 AK5Q9Y6K8 562 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 ARID1BQ8NFD5 2236 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 TDRD6O60522 2096 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 POM121BA6NF01 834 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 C16orf96A6NNT2 1141 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 TRIM38O00635 465 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 CREB3O43889 395 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 IGSF6O95976 241 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 XPAP23025 273 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 DGKAP23743 735 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 RABIFP47224 123 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 MYLK3Q32MK0 819 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 C19orf48Q6RUI8 117 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 SLC25A45Q8N413 288 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 RTL3Q8N8U3 475 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 OR4C6Q8NH72 309 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 HMCESQ96FZ2 354 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 DNAJC28Q9NX36 388 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 RAXQ9Y2V3 346 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 GPSM3Q9Y4H4 160 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 TRPM6Q9BX84 2022 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 ITPR1Q14643 2758 aa13.59□□□□□ -0.23
CTDSP1-212ENST00000494067 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.23
CTDSP1-212ENST00000494067 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 DDX3XO00571 662 aaKnown RBP eCLIP13.58□□□□□ -0.243e-13■■■□□ 17.9
CTDSP1-212ENST00000494067 INSIG1O15503 277 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 FGF10O15520 208 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 FFAR2O15552 330 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 SIGLEC6O43699 453 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PIAS2O75928 621 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 TMCC1O94876 653 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 HTR7P34969 479 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 RHOAP61586 193 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PTK2BQ14289 1009 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PROX2Q3B8N5 592 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PARP15Q460N3 678 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 INO80DQ53TQ3 878 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 KYAT3Q6YP21 454 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PARGQ86W56 976 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 CXorf40AQ8TE69 158 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 ASB12Q8WXK4 309 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 LENG8Q96PV6 779 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 KLF6Q99612 283 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 CNPY3Q9BT09 278 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 NRSN2Q9GZP1 204 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 HAUS4Q9H6D7 363 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 NLGN3Q9NZ94 848 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 LHX3Q9UBR4 397 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 KLF15Q9UIH9 416 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 PNMA8BQ9ULN7 279 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 MYO6Q9UM54 1294 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 CLCA2Q9UQC9 943 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 ANKRD36A6QL64 1941 aa13.58□□□□□ -0.24
CTDSP1-212ENST00000494067 ADAMTS20P59510 1910 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 IGLON5A6NGN9 336 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 WASH4PA8MWX3 477 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 RASA4BC9J798 803 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 RASA4O43374 803 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 UGT2B4P06133 528 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 MYF5P13349 255 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 TCF4P15884 667 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 THOP1P52888 689 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 GRM3Q14832 879 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 CYTH1Q15438 398 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 ZNF542PQ5EBM4 170 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 CFAP58Q5T655 872 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 PLEKHA7Q6IQ23 1121 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 LRRC69Q6ZNQ3 347 aa13.57□□□□□ -0.24
CTDSP1-212ENST00000494067 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms