RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ADCY2Q08462 1091 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 GALNT2Q10471 571 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 MYLK3Q32MK0 819 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 LRRC73Q5JTD7 316 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 FAM46CQ5VWP2 391 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PEAR1Q5VY43 1037 aaPredicted RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 PRR23CQ6ZRP0 262 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 B4GALNT4Q76KP1 1039 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 ATPAF2Q8N5M1 289 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 CADM4Q8NFZ8 388 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 OR14C36Q8NHC7 312 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 CASKIN2Q8WXE0 1202 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 BIRC7Q96CA5 298 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 GDAP1L1Q96MZ0 367 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 ORAI3Q9BRQ5 295 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 EBF2Q9HAK2 575 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 SGK2Q9HBY8 427 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 DONSONQ9NYP3 566 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 EIF2B4Q9UI10 523 aaKnown RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 GGT7Q9UJ14 662 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 PCDHGA5Q9Y5G8 931 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 CAPN6Q9Y6Q1 641 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 SPINT1O43278 529 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 PLRG1O43660 514 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 ZNF806P0C7X5 589 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 ITIH2P19823 946 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 ITGB7P26010 798 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 SERPINB6P35237 376 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 GARSP41250 739 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 ABL2P42684 1182 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 IRX4P78413 519 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 LBRQ14739 615 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 CSRP2Q16527 193 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 TAZQ16635 292 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 SPDYCQ5MJ68 293 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 TMCO4Q5TGY1 634 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 KAZNQ674X7 775 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 KIAA0895LQ68EN5 471 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 SLC9A4Q6AI14 798 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 AADACL2Q6P093 401 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 SPOCD1Q6ZMY3 1216 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 ERN2Q76MJ5 926 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 ZSWIM9Q86XI8 627 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 SYT12Q8IV01 421 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 MAP7D3Q8IWC1 876 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 KATNAL2Q8IYT4 538 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 RGL4Q8IZJ4 473 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 OR2T34Q8NGX1 318 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 ALG3Q92685 438 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 KLHL32Q96NJ5 620 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 CINPQ9BW66 212 aaPredicted RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 MIR1-1HGQ9H1L0 117 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 VPS45Q9NRW7 570 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 DDX56Q9NY93 547 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 DTLQ9NZJ0 730 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 ITM2BQ9Y287 266 aa11.81□□□□□ -0.52
UBA3-211ENST00000493957 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 ZNF487B1APH4 448 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 APOL1O14791 398 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 WNT9AO14904 365 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 LRP3O75074 770 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 POP4O95707 220 aaKnown RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 FTCDO95954 541 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 CFIP05156 583 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 MAT2AP31153 395 aaKnown RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 CTNNA1P35221 906 aaKnown RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 MAXP61244 160 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 KCNC4Q03721 635 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 GDPD4Q6W3E5 623 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 SRLQ86TD4 932 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 NT5DC3Q86UY8 548 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 CAMK1DQ8IU85 385 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
UBA3-211ENST00000493957 CCDC112Q8NEF3 446 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 OR2I1PQ8NGU4 316 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 KIAA1524Q8TCG1 905 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 DNASE2BQ8WZ79 361 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 KLK6Q92876 244 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
UBA3-211ENST00000493957 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms