RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 RPIAP49247 311 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 SKOR1P84550 965 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 PTK2BQ14289 1009 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 C2CD6Q53TS8 623 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 ZNF805Q5CZA5 627 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 PRRT3Q5FWE3 981 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 TRNP1Q6NT89 227 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 INO80CQ6PI98 192 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-205ENST00000493621 FAM131BQ86XD5 332 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 SLC35F3Q8IY50 421 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 FAM71AQ8IYT1 594 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 WDR36Q8NI36 951 aaKnown RBP12.53□□□□□ -0.4
SAMM50-205ENST00000493621 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 RAB7BQ96AH8 199 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 CFAP57Q96MR6 1250 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 TMEM51Q9NW97 253 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 PNMA8BQ9ULN7 279 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-205ENST00000493621 KRIT1O00522 736 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-205ENST00000493621 UGT2B4P06133 528 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 KRT10P13645 584 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-205ENST00000493621 IGFALSP35858 605 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 BPIFB4P59827 614 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 SPIDRQ14159 915 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 ZSCAN23Q3MJ62 389 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 LRRC73Q5JTD7 316 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 C6orf132Q5T0Z8 1188 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 TAF3Q5VWG9 929 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 LEKR1Q6ZMV7 388 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 CCDC81Q6ZN84 652 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 VPS36Q86VN1 386 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 NAT6Q93015 286 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 ISG20Q96AZ6 181 aaKnown RBP12.52□□□□□ -0.41
SAMM50-205ENST00000493621 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 MED8Q96G25 268 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 KLHL32Q96NJ5 620 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 CLPBQ9H078 707 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 NDFIP2Q9NV92 336 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 WDR70Q9NW82 654 aa12.52□□□□□ -0.41
SAMM50-205ENST00000493621 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
SAMM50-205ENST00000493621 PPARGC1AQ9UBK2 798 aaKnown RBP12.52□□□□□ -0.41
SAMM50-205ENST00000493621 LRP4O75096 1905 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 CCDC187A0A096LP49 1063 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 LMO7DNF2Z398 122 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 YY2O15391 372 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 GSRP00390 522 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 CYP11B1P15538 503 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ETFBP38117 255 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 PDX1P52945 283 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ATP11AP98196 1134 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 CLN3Q13286 438 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 POLD3Q15054 466 aaPredicted RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 RAB6CQ53S08 254 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ATXN7L2Q5T6C5 722 aaPredicted RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 RWDD4Q6NW29 188 aaKnown RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 BNIPLQ7Z465 357 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 CLEC14AQ86T13 490 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 EMC1Q8N766 993 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 OR2AP1Q8NGE2 309 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 WDR48Q8TAF3 677 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ARHGEF2Q92974 986 aaKnown RBP12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 TBATAQ96M53 351 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 RAB6CQ9H0N0 254 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 PADI4Q9UM07 663 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 MAST4O15021 2626 aa12.51□□□□□ -0.41
SAMM50-205ENST00000493621 ANKRD36A6QL64 1941 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 SCN8AQ9UQD0 1980 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 AREL1O15033 823 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 SLC28A2O43868 658 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 MMP20O60882 483 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 TM7SF2O76062 418 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 POP4O95707 220 aaKnown RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 CELA2BP08218 269 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 TSHRP16473 764 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 MLLT3P42568 568 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 YPEL5P62699 121 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 PPARDQ03181 441 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
SAMM50-205ENST00000493621 TCEA2Q15560 299 aa12.5□□□□□ -0.41
SAMM50-205ENST00000493621 CDO1Q16878 200 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms