RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 PRLRP16471 622 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 DESP17661 470 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 CD38P28907 300 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 PMLP29590 882 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 MAN1A1P33908 653 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 RECQLP46063 649 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 NOVA1P51513 510 aaKnown RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 NEK3P51956 506 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 SNRPD1P62314 119 aaKnown RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 FOXK2Q01167 660 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 SLC10A7Q0GE19 358 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 IHHQ14623 411 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 LRRC73Q5JTD7 316 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 PRAMEF14Q5SWL7 426 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 NAPEPLDQ6IQ20 393 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 NEK5Q6P3R8 708 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 KDM7AQ6ZMT4 941 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 PGBD5Q8N414 524 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 PQLC3Q8N755 202 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 CTNNBL1Q8WYA6 563 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 SERAC1Q96JX3 654 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 GDAP1L1Q96MZ0 367 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 KLF6Q99612 283 aaPredicted RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 CPEB1Q9BZB8 566 aaKnown RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 KLHL11Q9NVR0 708 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 IPO11Q9UI26 975 aaKnown RBP13.84□□□□□ -0.19
PDCD11-206ENST00000493610 BTBD3Q9Y2F9 522 aa13.84□□□□□ -0.19
PDCD11-206ENST00000493610 SHROOM3Q8TF72 1996 aa13.83□□□□□ -0.19
PDCD11-206ENST00000493610 DFFAO00273 331 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 DAPK3O43293 454 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 MFSD11O43934 449 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 TOP3BO95985 862 aaKnown RBP13.83□□□□□ -0.2
PDCD11-206ENST00000493610 CEACAM1P13688 526 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 CR2P20023 1033 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 CDH6P55285 790 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 NXPH1P58417 271 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 RHOAP61586 193 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 IL10RBQ08334 325 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 SLC10A2Q12908 348 aaPredicted RBP13.83□□□□□ -0.2
PDCD11-206ENST00000493610 SLC14A1Q13336 389 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 NCBP2-AS2Q69YL0 99 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 GDPD4Q6W3E5 623 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 GCNT7Q6ZNI0 430 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 BMFQ96LC9 184 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 GPR27Q9NS67 375 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 TM7SF3Q9NS93 570 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 ZNHIT6Q9NWK9 470 aaKnown RBP13.83□□□□□ -0.2
PDCD11-206ENST00000493610 RCOR3Q9P2K3 495 aaPredicted RBP13.83□□□□□ -0.2
PDCD11-206ENST00000493610 DKK3Q9UBP4 350 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 TPX2Q9ULW0 747 aaKnown RBP13.83□□□□□ -0.2
PDCD11-206ENST00000493610 DMTF1Q9Y222 760 aa13.83□□□□□ -0.2
PDCD11-206ENST00000493610 SPEGQ15772 3267 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 SPAARA0A1B0GVQ0 90 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 TTC24A2A3L6 582 aaPredicted RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 RCCD1A6NED2 376 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 TLR4O00206 839 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 SLC31A1O15431 190 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 IGSF6O95976 241 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 ARL4AP40617 200 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 CSNK1DP48730 415 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 ATXN3P54252 364 aaPredicted RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 MESDQ14696 234 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 PAFAH1B3Q15102 231 aaKnown RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 TEAD4Q15561 434 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 RYBPQ8N488 228 aaPredicted RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 LZTR1Q8N653 840 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 MFSD2AQ8NA29 543 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 RFFLQ8WZ73 363 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 ECHDC3Q96DC8 303 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 PPP1R16AQ96I34 528 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 MYOCQ99972 504 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 PCOLCE2Q9UKZ9 415 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 REXO2Q9Y3B8 237 aaKnown RBP13.82□□□□□ -0.2
PDCD11-206ENST00000493610 PCDHGB2Q9Y5G2 931 aa13.82□□□□□ -0.2
PDCD11-206ENST00000493610 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
PDCD11-206ENST00000493610 IGLON5A6NGN9 336 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 TMEM110-MUSTN1A8MSY1 372 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 TRAFD1O14545 582 aaPredicted RBP13.81□□□□□ -0.2
PDCD11-206ENST00000493610 CER1O95813 267 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 GJC1P36383 396 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 NUDT1P36639 197 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
PDCD11-206ENST00000493610 CLDN2P57739 230 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 IL9RQ01113 521 aa13.81□□□□□ -0.2
PDCD11-206ENST00000493610 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms