RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TEX47Q8TBZ9 253 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SLC9A6Q92581 669 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 RIT1Q92963 219 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ALKBH8Q96BT7 664 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 HSFY1Q96LI6 401 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 KCTD14Q9BQ13 255 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 GON7Q9BXV9 100 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 UCK2Q9BZX2 261 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 INTS7Q9NVH2 962 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM216Q9P0N5 145 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 RPH3AQ9Y2J0 694 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TNKSO95271 1327 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 A0A0A6YYK5 440 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM49D1C9J1S8 452 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SLC22A1O15245 554 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 DCXO43602 365 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 NDUFS6O75380 124 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 INHBAP08476 426 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 UCHL3P15374 230 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 NPR3P17342 541 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 MSH3P20585 1137 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 COMTP21964 271 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CPOXP36551 454 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TRAPPC10P48553 1259 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CLCNKBP51801 687 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SNRPD2P62316 118 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ALDH6A1Q02252 535 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 NAB1Q13506 487 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 IKBKEQ14164 716 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 GRM4Q14833 912 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 DRAP1Q14919 205 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PRKD1Q15139 912 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 DGUOKQ16854 277 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ZCCHC23Q6ZST2 131 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 LILRA2Q8N149 483 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC185Q8N715 623 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 OR7A2PQ8NGA2 310 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 OR8H1Q8NGG4 311 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 RAET1EQ8TD07 263 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TUBA1CQ9BQE3 449 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ZSWIM1Q9BR11 485 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 THAP2Q9H0W7 228 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SH3GLB2Q9NR46 395 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SRCAPQ6ZRS2 3230 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 BTN3A1O00481 513 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TFECO14948 347 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 AXIN1O15169 862 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TPST1O60507 370 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 FGF18O76093 207 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TOP3BO95985 862 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 XRCC1P18887 633 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 MATN1P21941 496 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 OSBPP22059 807 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TALDO1P37837 337 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 FKBP1AP62942 108 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 KCNH2Q12809 1159 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TARDBPQ13148 414 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 DLGAP5Q15398 846 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 UGP2Q16851 508 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ARHGEF16Q5VV41 709 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 FAM91A1Q658Y4 838 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CENPPQ6IPU0 288 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SCUBE3Q8IX30 993 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CLYBLQ8N0X4 340 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 LRTOMTQ8WZ04 291 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TRIB2Q92519 343 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TTC9Q92623 222 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ATP6V1E2Q96A05 226 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TP53INP1Q96A56 240 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 AGAP4Q96P64 663 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC106Q9BWC9 280 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM245Q9H330 911 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SLC39A1Q9NY26 324 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 RIMS3Q9UJD0 308 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PSTPIP1O43586 416 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 HMGN1P05114 100 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 GRIK1P39086 918 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TMBIM6P55061 237 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ABRQ12979 859 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SELPLGQ14242 412 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PLCL1Q15111 1095 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 BROXQ5VW32 411 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PDPK2PQ6A1A2 396 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 FAM180BQ6P0A1 224 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 BEND5Q7L4P6 421 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 KIAA0895Q8NCT3 520 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TRPM4Q8TD43 1214 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PAFAH2Q99487 392 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NOL11Q9H8H0 719 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PCOLCE2Q9UKZ9 415 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ASTN2O75129 1339 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 A0A0X1KG70 313 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 KPNA5O15131 536 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NDST3O95803 873 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 KRT18P05783 430 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms