RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 A0A1B0GVT2 93 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 A0A1W2PPC4 97 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GXYLT2A0PJZ3 443 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 BECN2A8MW95 431 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 ERVV-1B6SEH8 477 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 APOL1O14791 398 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 DHHO43323 396 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 SPRY3O43610 288 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PLIN1O60240 522 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 ECE2O60344 883 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 UFL1O94874 794 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 NDST3O95803 873 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 VEGFAP15692 232 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-218ENST00000493430 ARSBP15848 533 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 TSHRP16473 764 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 Q0VFX4 171 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GRAPQ13588 217 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PRKG1Q13976 671 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GPR18Q14330 331 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GALNT3Q14435 633 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PRAMEF19Q5SWL8 479 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 C10orf76Q5T2E6 689 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 CLEC4GQ6UXB4 293 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GSG1LQ6UXU4 331 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 ADGRF3Q8IZF5 1079 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GABPB2Q8TAK5 448 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-218ENST00000493430 GRAPLQ8TC17 118 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-218ENST00000493430 RBM17Q96I25 401 aaKnown RBP3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PUS3Q9BZE2 481 aaKnown RBP3.51□□□□□ -1.85
PTCD3-218ENST00000493430 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.51□□□□□ -1.851e-6■■■□□ 14.7
PTCD3-218ENST00000493430 RGL1Q9NZL6 768 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 HACL1Q9UJ83 578 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 ATP6V0A2Q9Y487 856 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PTGDR2Q9Y5Y4 395 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 CNTNAP1P78357 1384 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PCNTO95613 3336 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 KIAA0100Q14667 2235 aaKnown RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 INAFM1C9JVW0 142 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 J3KTA2 159 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 MSI1O43347 362 aaKnown RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 RGS14O43566 566 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ITGA5P08648 1049 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 PKMP14618 531 aaKnown RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 STT3AP46977 705 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CASP5P51878 434 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ART1P52961 327 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 SHC2P98077 582 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 DSC1Q08554 894 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 LMOD3Q0VAK6 560 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 GPS2Q13227 327 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 SHBQ15464 509 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 IZUMO4Q1ZYL8 232 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ARL13BQ3SXY8 428 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ALG10Q5BKT4 473 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ALG10BQ5I7T1 473 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 OTUD1Q5VV17 481 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CST9Q5W186 159 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 PPP1R42Q7Z4L9 355 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 TXLNBQ8N3L3 684 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CERS5Q8N5B7 392 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 EXD3Q8N9H8 876 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 GLIS1Q8NBF1 620 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 TBC1D16Q8TBP0 767 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 SLC22A17Q8WUG5 538 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 TIFAQ96CG3 184 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ZNF419Q96HQ0 510 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 NYXQ9GZU5 481 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 MAGEH1Q9H213 219 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 PLSCR4Q9NRQ2 329 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CWC25Q9NXE8 425 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 GGA3Q9NZ52 723 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 DBF4Q9UBU7 674 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ABT1Q9ULW3 272 aaKnown RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CA14Q9ULX7 337 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 ICAM5Q9UMF0 924 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 G3BP2Q9UN86 482 aaKnown RBP3.5□□□□□ -1.85
PTCD3-218ENST00000493430 PCDHGB1Q9Y5G3 927 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 MYH7BA7E2Y1 1941 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 WDR81Q562E7 1941 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 LOXHD1Q8IVV2 1947 aa3.5□□□□□ -1.85
PTCD3-218ENST00000493430 CLRN2A0PK11 232 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 CLEC18AA5D8T8 446 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 CXorf65A6NEN9 183 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 NKX2-8O15522 239 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 ANP32CO43423 234 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 NEURL1O76050 574 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 LCATP04180 440 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 PRSS2P07478 247 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 ALDOCP09972 364 aaKnown RBP3.49□□□□□ -1.85
PTCD3-218ENST00000493430 NBPF7P0C2Y1 421 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-218ENST00000493430 LBX1P52954 281 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 LRRC24Q50LG9 513 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 PARP10Q53GL7 1025 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 ENTPD8Q5MY95 495 aa3.49□□□□□ -1.85
PTCD3-218ENST00000493430 SLC10A5Q5PT55 438 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms