RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 RRN3Q9NYV6 651 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 NCKIPSDQ9NZQ3 722 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 APOBEC3BQ9UH17 382 aaKnown RBP13.92□□□□□ -0.18
SAMM50-204ENST00000493161 RABGEF1Q9UJ41 708 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 STAP1Q9ULZ2 295 aa13.92□□□□□ -0.18
SAMM50-204ENST00000493161 DOCK4Q8N1I0 1966 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 RP1P56715 2156 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 NEMP1O14524 444 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 YY2O15391 372 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 TSPAN6O43657 245 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 TCEA3O75764 348 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 F9P00740 461 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 UGT2B4P06133 528 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 TSHRP16473 764 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 GABRB2P47870 512 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 SLC20A2Q08357 652 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 ARL13BQ3SXY8 428 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 C6orf132Q5T0Z8 1188 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 DPY19L2P1Q6NXN4 242 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 ZNF783Q6ZMS7 281 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 VPS36Q86VN1 386 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 ZDHHC17Q8IUH5 632 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 TPCN2Q8NHX9 752 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 WDR36Q8NI36 951 aaKnown RBP13.91□□□□□ -0.18
SAMM50-204ENST00000493161 GRAMD1AQ96CP6 724 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 FAM81BQ96LP2 452 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 ZYG11BQ9C0D3 744 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 WDR70Q9NW82 654 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 SPASTQ9UBP0 616 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 PADI4Q9UM07 663 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 PIEZO2Q9H5I5 2752 aa13.91□□□□□ -0.18
SAMM50-204ENST00000493161 LMO7DNF2Z398 122 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 GOLGA8SH3BPF8 625 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 KRIT1O00522 736 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 NTN3O00634 580 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-204ENST00000493161 AREL1O15033 823 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 MMP20O60882 483 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 GADD45BO75293 160 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-204ENST00000493161 HGFP14210 728 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 SNX16P57768 344 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 KCNC4Q03721 635 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 TGIF1Q15583 401 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 LINC00303Q3SY05 128 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 ZNF805Q5CZA5 627 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 ATXN7L2Q5T6C5 722 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-204ENST00000493161 FAXCQ5TGI0 409 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 FAM71AQ8IYT1 594 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 ARL14Q8N4G2 192 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 BTN2A2Q8WVV5 523 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 ASB12Q8WXK4 309 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 C18orf8Q96DM3 657 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
SAMM50-204ENST00000493161 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 HAPLN3Q96S86 360 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 TMEM59LQ9UK28 342 aa13.9□□□□□ -0.18
SAMM50-204ENST00000493161 MAST4O15021 2626 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 CCDC187A0A096LP49 1063 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 FAM72CH0Y354 149 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 AGRPO00253 132 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 NOBOXO60393 691 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 WISP1O95388 367 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 ANXA6P08133 673 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 ITGA2BP08514 1039 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 SLC5A2P31639 672 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 CDH5P33151 784 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 EIF4A3P38919 411 aaKnown RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 RPIAP49247 311 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 THOP1P52888 689 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 ATP11AP98196 1134 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 SPIDRQ14159 915 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 MYLK3Q32MK0 819 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 FAM72AQ5TYM5 149 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 FAM72DQ6L9T8 149 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 PRICKLE2Q7Z3G6 844 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 NLRP14Q86W24 1093 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 FAM72BQ86X60 149 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 PLPP6Q8IY26 295 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 EMC1Q8N766 993 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 KYQ8NBH2 561 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 TMEM35BQ8NCS4 154 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 DENND6BQ8NEG7 585 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 ARHGEF2Q92974 986 aaKnown RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 RAB7BQ96AH8 199 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 ISG20Q96AZ6 181 aaKnown RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 CCNL2Q96S94 520 aaPredicted RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 FOXP3Q9BZS1 431 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 SLC13A1Q9BZW2 595 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 SIRPGQ9P1W8 387 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 PPARGC1AQ9UBK2 798 aaKnown RBP13.89□□□□□ -0.19
SAMM50-204ENST00000493161 GULP1Q9UBP9 304 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 DNAI1Q9UI46 699 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 PAXBP1Q9Y5B6 917 aa13.89□□□□□ -0.19
SAMM50-204ENST00000493161 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
SAMM50-204ENST00000493161 ARHGAP6O43182 974 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms