RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SAMD11Q96NU1 681 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 FAM111AQ96PZ2 611 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 FAM167BQ9BTA0 163 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 TREX1Q9NSU2 369 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 FGFR1OP2Q9NVK5 253 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 GGA2Q9UJY4 613 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 GRID1Q9ULK0 1009 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 ARHGAP26Q9UNA1 814 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 ATXN2Q99700 1313 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-208ENST00000492896 C2orf16Q68DN1 1984 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 LOC285095A0A1B0GVY8 99 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 TTC24A2A3L6 582 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CBX4O00257 560 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 LEFTY2O00292 366 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 GRM6O15303 877 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CLASP2O75122 1294 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 XYLBO75191 536 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 NDST3O95803 873 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 EPOP01588 193 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 HNRNPA1P09651 372 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ATXN1LP0C7T5 689 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PTPN2P17706 415 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CES1P23141 567 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CRHR1P34998 444 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CSKP41240 450 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ETV4P43268 484 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ARF5P84085 180 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ZXDBP98169 803 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PDE1BQ01064 536 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CDK18Q07002 472 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 THOC5Q13769 683 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 IHHQ14623 411 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ITIH4Q14624 930 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CYTH1Q15438 398 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 UGP2Q16851 508 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 MPPE1Q53F39 396 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ARHGAP15Q53QZ3 475 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 STXBP5Q5T5C0 1151 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 TSTD2Q5T7W7 516 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PDE12Q6L8Q7 609 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ESRP1Q6NXG1 681 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 NLRP9Q7RTR0 991 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PIGWQ7Z7B1 504 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 BBS7Q8IWZ6 715 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 DCLK2Q8N568 766 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ANKS4BQ8N8V4 417 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 DCAF4L2Q8NA75 395 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 GABPB2Q8TAK5 448 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 DDI1Q8WTU0 396 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ATP2A3Q93084 1043 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ISL2Q96A47 359 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 GRAMD1AQ96CP6 724 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 CABS1Q96KC9 395 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ZNF778Q96MU6 729 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 AGAP2Q99490 1192 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ELAC2Q9BQ52 826 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 VPS11Q9H270 941 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 HCFC1R1Q9NWW0 138 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 PLLPQ9Y342 182 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ACTL7AQ9Y615 435 aa9.24□□□□□ -0.93
SMARCC1-208ENST00000492896 ZNF106Q9H2Y7 1883 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 SCN8AQ9UQD0 1980 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 E2F8A0AVK6 867 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 WDR91A4D1P6 747 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 GOLGA8TH3BQL2 631 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 INSIG1O15503 277 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 SNX3O60493 162 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 SNAP91O60641 907 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 SIN3BO75182 1162 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 RFPL2O75678 378 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 GJB3O75712 270 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 ZMPSTE24O75844 475 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 KIAA0754O94854 1291 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 TMCC1O94876 653 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 ARHGEF15O94989 841 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 VAPBO95292 243 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 ALDOAP04075 364 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 CYBBP04839 570 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 MPOP05164 745 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 RHOP08100 348 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 POU2F2P09086 479 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 NEFHP12036 1026 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 EPCAMP16422 314 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 CR2P20023 1033 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 ARNTP27540 789 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 MZF1P28698 734 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 IRS1P35568 1242 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 AVPR1AP37288 418 aa9.23□□□□□ -0.93
SMARCC1-208ENST00000492896 HADHAP40939 763 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms