RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TMEM159Q96B96 161 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 HDAC8Q9BY41 377 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 DDIT4Q9NX09 232 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 COX16Q9P0S2 106 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 KLF15Q9UIH9 416 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 HS3ST4Q9Y661 456 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 CSNK1G3Q9Y6M4 447 aa11.93□□□□□ -0.5
CACNA1C-228ENST00000492150 PRAMEF33A0A0G2JMD5 474 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 SPTY2D1-AS1A0A0U1RR47 76 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 A6NNZ2 444 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 ZNF891A8MT65 544 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CASC3O15234 703 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 RAD51BO15315 384 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 P4HA2O15460 535 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PRAMEF10O60809 474 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CLDN11O75508 207 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CNTN5O94779 1100 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CSF2P04141 144 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PRNPP04156 253 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 KRT5P13647 590 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 RRM1P23921 792 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 ITGB7P26010 798 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CDH4P55283 916 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 CCDC15Q0P6D6 951 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PDCLQ13371 301 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PERM1Q5SV97 790 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 TPRG1LQ5T0D9 272 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 KYAT3Q6YP21 454 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PTAR1Q7Z6K3 402 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 WDTC1Q8N5D0 677 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 FAM174AQ8TBP5 190 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 RNF34Q969K3 372 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 GSDMAQ96QA5 445 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 SRRTQ9BXP5 876 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 MUC3BQ9H195 1237 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 EPB41L5Q9HCM4 733 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 ACP6Q9NPH0 428 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PISDQ9UG56 409 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 VPS51Q9UID3 782 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 TP53TG5Q9Y2B4 290 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 TRPM6Q9BX84 2022 aa11.92□□□□□ -0.5
CACNA1C-228ENST00000492150 PAGE1O75459 146 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ZNF821O75541 412 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 GRAP2O75791 330 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 PAK4O96013 591 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 GLI1P08151 1106 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 HGFP14210 728 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 KRT83P78385 493 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CETN1Q12798 172 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 NR0B2Q15466 257 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ALFQ53S48 1182 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 TCTN3Q6NUS6 607 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CRTC1Q6UUV9 634 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 B3GNT8Q7Z7M8 397 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 GRIN3AQ8TCU5 1115 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CCDC114Q96M63 670 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CEP63Q96MT8 703 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 C2orf49Q9BVC5 232 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 UNKQ9C0B0 810 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 SCAND2PQ9GZW5 306 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 CDH19Q9H159 772 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 TNKS2Q9H2K2 1166 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 DYRK4Q9NR20 520 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ASNSD1Q9NWL6 643 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 FOXJ2Q9P0K8 574 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 WASF2Q9Y6W5 498 aa11.91□□□□□ -0.5
CACNA1C-228ENST00000492150 EFCAB7A8K855 629 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 STMND1H3BQB6 276 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 I6L893 689 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 TPP1O14773 563 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 SPINT1O43278 529 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 AQP9O43315 295 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 THAP12O43422 761 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 MED7O43513 233 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 LEFTY1O75610 366 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 RHOCP08134 193 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 RPS21P63220 83 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 NME3Q13232 169 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 SEPT6Q14141 434 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 DEFB133Q30KQ1 61 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 ARTNQ5T4W7 220 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms