RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 DDX23Q9BUQ8 820 aaKnown RBP4.11□□□□□ -1.75
PHC3-213ENST00000491258 STK33Q9BYT3 514 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 GFRA4Q9GZZ7 299 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 UPB1Q9UBR1 384 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 AKNAQ7Z591 1439 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 NEO1Q92859 1461 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 KDM6BO15054 1643 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 A0A1B0GU03 582 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 A0A1B0GVY2 172 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 P2RY10O00398 339 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 APAF1O14727 1248 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 KIF1CO43896 1103 aaKnown RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 CCNT1O60563 726 aaKnown RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 PLA2G6O60733 806 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 SKIV2L2P42285 1042 aaKnown RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 ZNF132P52740 706 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 ADORA2A-AS1P86434 159 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 SAFBQ15424 915 aaKnown RBP eCLIP4.1□□□□□ -1.75
PHC3-213ENST00000491258 SETMARQ53H47 684 aaPredicted RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 NEK10Q6ZWH5 1172 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 TMC8Q8IU68 726 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 SCAIQ8N9R8 606 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 ATOH1Q92858 354 aaPredicted RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 ARRDC3Q96B67 414 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 TRMT61BQ9BVS5 477 aaKnown RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 BRD8Q9H0E9 1235 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 CERS4Q9HA82 394 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 SLC22A11Q9NSA0 550 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 HERC5Q9UII4 1024 aaKnown RBP4.1□□□□□ -1.75
PHC3-213ENST00000491258 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 PLCH2O75038 1416 aa4.1□□□□□ -1.75
PHC3-213ENST00000491258 TARSL2A2RTX5 802 aaKnown RBP4.09□□□□□ -1.75
PHC3-213ENST00000491258 RASA4O43374 803 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 FGF17O60258 216 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 IGHV4-30-4P0DP06 118 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 YWHAQP27348 245 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 FCN2Q15485 313 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 TRIM60Q495X7 471 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 TBC1D9BQ66K14 1250 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 NCAPH2Q6IBW4 605 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 AADACL2Q6P093 401 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 OR2C3Q8N628 320 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 STT3BQ8TCJ2 826 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 USP13Q92995 863 aaPredicted RBP4.09□□□□□ -1.75
PHC3-213ENST00000491258 CLPBQ9H078 707 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 KLQ9UEF7 1012 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 PHTF1Q9UMS5 762 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 DHDHQ9UQ10 334 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 FMN1Q68DA7 1419 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 SCAPERQ9BY12 1400 aa4.09□□□□□ -1.75
PHC3-213ENST00000491258 DENND4BO75064 1496 aaPredicted RBP4.09□□□□□ -1.75
PHC3-213ENST00000491258 A0A096LPK6 155 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 EFCAB8A8MWE9 144 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 EDIL3O43854 480 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 SLC22A3O75751 556 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 VNN2O95498 520 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 ATP1A1P05023 1023 aaKnown RBP4.08□□□□□ -1.76
PHC3-213ENST00000491258 CYP4B1P13584 511 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 DCTDP32321 178 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 GPR12P47775 334 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 HSPA2P54652 639 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 LONRF1Q17RB8 773 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 ACCSLQ4AC99 568 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 ZNF772Q68DY9 489 aaPredicted RBP4.08□□□□□ -1.76
PHC3-213ENST00000491258 KLHL24Q6TFL4 600 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 DGLUCYQ7Z3D6 616 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 GALNT7Q86SF2 657 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
PHC3-213ENST00000491258 GALNT15Q8N3T1 639 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 ZNF441Q8N8Z8 693 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 KBTBD3Q8NAB2 608 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 PIGSQ96S52 555 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 SARGQ9BW04 601 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 LRFN1Q9P244 771 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 RCE1Q9Y256 329 aa4.08□□□□□ -1.76
PHC3-213ENST00000491258 FANCAO15360 1455 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 PTPRMP28827 1452 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 ARHGAP35Q9NRY4 1499 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 YEATS2Q9ULM3 1422 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 IGKV3D-20A0A0C4DH25 116 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 AQP12BA6NM10 295 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 CBX6O95503 412 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 ZNF883P0CG24 379 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 GYS1P13807 737 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 CLCN3P51790 818 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 RPS6KA2Q15349 733 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 DCAF6Q58WW2 860 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 ATPAF1Q5TC12 328 aaPredicted RBP4.07□□□□□ -1.76
PHC3-213ENST00000491258 PLA2G4FQ68DD2 849 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 SLC26A9Q7LBE3 791 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 EPHX4Q8IUS5 362 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 BRSK2Q8IWQ3 736 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 AADATQ8N5Z0 425 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 SLC2A12Q8TD20 617 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 STYXQ8WUJ0 223 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 TRIB2Q92519 343 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 RSC1A1Q92681 617 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 KIAA1191Q96A73 305 aa4.07□□□□□ -1.76
PHC3-213ENST00000491258 MVB12BQ9H7P6 319 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms