RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DAZAP1Q96EP5 407 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HSPBAP1Q96EW2 488 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CHMP6Q96FZ7 201 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 IFT74Q96LB3 600 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MBOAT7Q96N66 472 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 INPP4AQ96PE3 977 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 FCRL4Q96PJ5 515 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF317Q96PQ6 595 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 XPO6Q96QU8 1125 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SPAG5Q96R06 1193 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 IWS1Q96ST2 819 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 AGPAT1Q99943 283 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HSD17B14Q9BPX1 270 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NTPCRQ9BSD7 190 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TXLNGYQ9BZA5 131 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TRIM7Q9C029 511 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TINAGL1Q9GZM7 467 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 UBA5Q9GZZ9 404 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CARD9Q9H257 536 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DHX36Q9H2U1 1008 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRC19Q9H756 370 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 VCPKMTQ9H867 229 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 JMJD4Q9H9V9 463 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MLXIPQ9HAP2 919 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TUFT1Q9NNX1 390 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CD209Q9NNX6 404 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TYW1Q9NV66 732 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 HAUS2Q9NVX0 235 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DMAC2Q9NW81 257 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MAP3K20Q9NYL2 800 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 VSX1Q9NZR4 365 aaPredicted RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KCND2Q9NZV8 630 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 NYAP2Q9P242 653 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 SEL1LQ9UBV2 794 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DDX25Q9UHL0 483 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 RASAL2Q9UJF2 1139 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MTUS1Q9ULD2 1270 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ODF2LQ9ULJ1 636 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 AGAP1Q9UPQ3 857 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 DRG1Q9Y295 367 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MYH14Q7Z406 1995 aaKnown RBP2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 CACNA1SQ13698 1873 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 KCPQ6ZWJ8 1503 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 A0A1B0GUL6 1792 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 TNS3Q68CZ2 1445 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ADAMTSL3P82987 1691 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 LOXHD1Q8IVV2 1947 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 PFASO15067 1338 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 FLT1P17948 1338 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 MYO3BQ8WXR4 1341 aa2.15□□□□□ -2.07
SNRNP40-207ENST00000491106 ARAP2Q8WZ64 1704 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 IGKV6D-41A0A0C4DH26 115 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 A1L4Q6 167 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PRRT4C9JH25 899 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ANKRD65E5RJM6 399 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 E7ENQ6 273 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 E9PLN8 166 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 E9PMD0 336 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 AP4M1O00189 453 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 FOXN3O00409 490 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 IPO5O00410 1097 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PPP6CO00743 305 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GABRDO14764 452 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RASGRF2O14827 1237 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DSCR3O14972 297 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 EIF3DO15371 548 aaKnown RBP eCLIP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGEB2O15479 319 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RGS16O15492 202 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TGFB1I1O43294 461 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 THAP12O43422 761 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NCK2O43639 380 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D4O60343 1298 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PLA2G6O60733 806 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HNRNPCL1O60812 293 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CAND2O75155 1236 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 C1QL1O75973 258 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MTA2O94776 668 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLITRK3O94933 977 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 UNC5CO95185 931 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ANP32DO95626 131 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ONECUT2O95948 504 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 IGKV2-30P06310 120 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ATXN1LP0C7T5 689 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GOLGA8HP0CJ92 632 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KRT13P13646 458 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 HDCP19113 662 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 VCAM1P19320 739 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 WT1P19544 449 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DRD4P21917 467 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NR2F2P24468 414 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CTNNA2P26232 953 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TMOD1P28289 359 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PRDX5P30044 214 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ABCD1P33897 745 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MAN1A1P33908 653 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PTGER1P34995 402 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 NF2P35240 595 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RFC4P35249 363 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GCKP35557 465 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 COILP38432 576 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms