RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 HOXB2P14652 356 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 CA4P22748 312 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 CD86P42081 329 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 MAGEA6P43360 314 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 MRPS25P82663 173 aaKnown RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 SKOR1P84550 965 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 MPP3Q13368 585 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 CAMK2GQ13555 558 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 STARD3Q14849 445 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 C9orf64Q5T6V5 341 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 DUPD1Q68J44 220 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 PCGF5Q86SE9 256 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 PRPF39Q86UA1 669 aaKnown RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 RYBPQ8N488 228 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 TXNDC5Q8NBS9 432 aaKnown RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 BBOF1Q8ND07 529 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 SNF8Q96H20 258 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 RBM15Q96T37 977 aaKnown RBP eCLIP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 GORASP1Q9BQQ3 440 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 HEPHQ9BQS7 1158 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 FOXQ1Q9C009 403 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 ATP13A3Q9H7F0 1226 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 ZDHHC4Q9NPG8 344 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 EIF2B3Q9NR50 452 aaKnown RBP18.85■□□□□ 0.61
MCF2L-230ENST00000491028 MMP17Q9ULZ9 603 aa18.85■□□□□ 0.61
MCF2L-230ENST00000491028 E7EVH7 732 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 SMAPO00193 183 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 SYNCRIPO60506 623 aaKnown RBP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 ATG13O75143 517 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 ALADP13716 330 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 IVDP26440 423 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 WASP42768 502 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 DRG2P55039 364 aaKnown RBP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 SLC7A5Q01650 507 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 BCL2L1Q07817 233 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 FZD5Q13467 585 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 FAXCQ5TGI0 409 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 DSG4Q86SJ6 1040 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 SPATA22Q8NHS9 363 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 SEC14L1Q92503 715 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 CLDN23Q96B33 292 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 MLPHQ9BV36 600 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 OSBPL1AQ9BXW6 950 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 TRIM31Q9BZY9 425 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 MFSD1Q9H3U5 465 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 MTG2Q9H4K7 406 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 ZDHHC6Q9H6R6 413 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 PRSS16Q9NQE7 514 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 IL36AQ9UHA7 158 aa18.84■□□□□ 0.61
MCF2L-230ENST00000491028 TPX2Q9ULW0 747 aaKnown RBP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 MTF2Q9Y483 593 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-230ENST00000491028 TTC24A2A3L6 582 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 BHMG1C9JSJ3 638 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 F5H423 210 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 STK25O00506 426 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 ADAM23O75077 832 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 GJB3O75712 270 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 SEC31AO94979 1220 aaKnown RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 AP2A1O95782 977 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 MT-CYBP00156 380 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 PRNPP04156 253 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 TPSB2P20231 275 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 SERPINA4P29622 427 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 MAGEA9P43362 315 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 RPS9P46781 194 aaKnown RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 CDK16Q00536 496 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 KCNJ11Q14654 390 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 TPSAB1Q15661 275 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 IZUMO3Q5VZ72 239 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 KCTD11Q693B1 232 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 KDELC1Q6UW63 502 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 TRIM67Q6ZTA4 783 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 HOOK3Q86VS8 718 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 PPIL6Q8IXY8 311 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 TAB3Q8N5C8 712 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 CHST14Q8NCH0 376 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 OR6K2Q8NGY2 324 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 UBXN4Q92575 508 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 RUBCNQ92622 972 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 ZNF641Q96N77 438 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 IER2Q9BTL4 223 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 TDRD1Q9BXT4 1180 aaKnown RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 LRRC40Q9H9A6 602 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 WHRNQ9P202 907 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 DMGDHQ9UI17 866 aaKnown RBP18.83■□□□□ 0.6
MCF2L-230ENST00000491028 WASF2Q9Y6W5 498 aa18.83■□□□□ 0.6
MCF2L-230ENST00000491028 A0A1W2PQ67 120 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 APRTP07741 180 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 RHOXF2BP0C7M4 288 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 ITIH2P19823 946 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 RPL21P46778 160 aaKnown RBP18.82■□□□□ 0.6
MCF2L-230ENST00000491028 LMAN1P49257 510 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 GUCY2DQ02846 1103 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 CALCOCO2Q13137 446 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 KCTD19Q17RG1 926 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-230ENST00000491028 RNASEH2BQ5TBB1 312 aaKnown RBP18.82■□□□□ 0.6
MCF2L-230ENST00000491028 Q6ZS52 159 aa18.82■□□□□ 0.6
MCF2L-230ENST00000491028 STK40Q8N2I9 435 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms