RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ATF7IP2Q5U623 682 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 SNRNP48Q6IEG0 339 aaKnown RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 NEK5Q6P3R8 708 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 SLC41A1Q8IVJ1 513 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 SNX27Q96L92 541 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 RIBC2Q9H4K1 309 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 MID1IP1Q9NPA3 183 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 CACNA2D2Q9NY47 1150 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 PNMA8BQ9ULN7 279 aaPredicted RBP11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 PDE10AQ9Y233 779 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 RAD54BQ9Y620 910 aa11.4□□□□□ -0.58
CRNKL1-204ENST00000490910 IGLV3-22A0A075B6J6 115 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 BBIP1A8MTZ0 92 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CCRL2O00421 344 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 LBPP18428 481 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 HSD17B4P51659 736 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 LIMK2P53671 638 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 RAB14P61106 215 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CSTF3Q12996 717 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ERMP1Q7Z2K6 904 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 GRPEL2Q8TAA5 225 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 HDAC10Q969S8 669 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 SIK2Q9H0K1 926 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 TSPAN16Q9UKR8 245 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 RGPD8O14715 1765 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CHD4Q14839 1912 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 KRBA1A5PL33 1030 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 NDUFS2O75306 463 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 FBXO21O94952 628 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 C4BPAP04003 597 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 IL1R1P14778 569 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 PTPN1P18031 435 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CPOXP36551 454 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CCT8P50990 548 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 STAT5BP51692 787 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 NFATC3Q12968 1075 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 POU6F1Q14863 301 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 PGM2L1Q6PCE3 622 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ZYG11AQ6WRX3 759 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 TIFABQ6ZNK6 161 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 NIPA1Q7RTP0 329 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ADGRF2Q8IZF7 708 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 SLC4A11Q8NBS3 891 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 CDC26Q8NHZ8 85 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ULK4Q96C45 1275 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 RHOBTB2Q9BYZ6 727 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ROGDIQ9GZN7 287 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 SLC17A6Q9P2U8 582 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 COPG1Q9Y678 874 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 A0A0J9YYE9 177 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 AQP12BA6NM10 295 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 PMPCBO75439 489 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 SERPINB7O75635 380 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 JCHAINP01591 159 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ICAM1P05362 532 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ITIH1P19827 911 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 IFNA8P32881 189 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 TYSND1Q2T9J0 566 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ANKDD1AQ495B1 522 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 DUS1LQ6P1R4 473 aaKnown RBP11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 AQP12AQ8IXF9 295 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 ATG16L2Q8NAA4 619 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 FBXO30Q8TB52 745 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 MTERF3Q96E29 417 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 FBXL20Q96IG2 436 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 KLHL32Q96NJ5 620 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 DHRS4Q9BTZ2 278 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 MOSPD1Q9UJG1 213 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 SPEF1Q9Y4P9 236 aa11.39□□□□□ -0.59
CRNKL1-204ENST00000490910 KCNQ2O43526 872 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ZBTB14O43829 449 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ANXA9O76027 345 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ACADSBP45954 432 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 TUBA3CQ13748 450 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 PCSK7Q16549 785 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF470Q6ECI4 717 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 FSTL4Q6MZW2 842 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 NEK10Q6ZWH5 1172 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 CHST15Q7LFX5 561 aaPredicted RBP11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 TRIM69Q86WT6 500 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ADHFE1Q8IWW8 467 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 MPP5Q8N3R9 675 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 RASSF5Q8WWW0 418 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 MRPL57Q9BQC6 102 aaKnown RBP11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 ZBTB26Q9HCK0 441 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 TRMT13Q9NUP7 481 aaKnown RBP11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 TIAM2Q8IVF5 1701 aa11.38□□□□□ -0.59
CRNKL1-204ENST00000490910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms