RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CHRNA3P32297 505 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CHKAP35790 457 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 FNTAP49354 379 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 AIF1P55008 147 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SLC7A5Q01650 507 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 RPL6Q02878 288 aaKnown RBP7.74□□□□□ -1.17
CLDN1-202ENST00000490800 TNP2Q05952 138 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SEMA3BQ13214 749 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 UAP1L1Q3KQV9 507 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ANKRD20A8PQ5CZ79 823 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 TRIM61Q5EBN2 209 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 PPP6R3Q5H9R7 873 aaPredicted RBP7.74□□□□□ -1.17
CLDN1-202ENST00000490800 FYB2Q5VWT5 728 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CCDC70Q6NSX1 233 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 C8orf74Q6P047 294 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SYT12Q8IV01 421 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 MAP7D3Q8IWC1 876 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 PYROXD2Q8N2H3 581 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 PQLC3Q8N755 202 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 PCDH19Q8TAB3 1148 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ATG4AQ8WYN0 398 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ANKRD7Q92527 254 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SPACA7Q96KW9 195 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 RNF157Q96PX1 679 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 GABRG3Q99928 467 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 FAM118BQ9BPY3 351 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ZNF670Q9BS34 389 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CALN1Q9BXU9 219 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SLC6A17Q9H1V8 727 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CD248Q9HCU0 757 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 TMEM9BQ9NQ34 198 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ARHGEF38Q9NXL2 777 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 MARCH2Q9P0N8 246 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 PCYOX1Q9UHG3 505 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 RAB21Q9UL25 225 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CLEC4EQ9ULY5 219 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 LAMA1P25391 3075 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 KCNU1A8MYU2 1149 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FAM72CH0Y354 149 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 APOC4-APOC2K7ER74 178 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 EIF1AYO14602 144 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 GIPC1O14908 333 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TTI1O43156 1089 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 LIASO43766 372 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TSPAN3O60637 253 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TNFRSF21O75509 655 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 HEXIM1O94992 359 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 PENKP01210 267 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 APOC2P02655 101 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 KCNJ1P48048 391 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 VSNL1P62760 191 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 DYNLT1P63172 113 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 ZNF33AQ06730 810 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SNX1Q13596 522 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 DPYSQ14117 519 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 DHX34Q14147 1143 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TFDP2Q14188 446 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 CCNG2Q16589 344 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 KCTD19Q17RG1 926 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 GEN1Q17RS7 908 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 ARL13BQ3SXY8 428 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SPDYCQ5MJ68 293 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 BRMS1LQ5PSV4 323 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 ARTNQ5T4W7 220 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FAM72AQ5TYM5 149 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 LYSMD4Q5XG99 296 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SLC9A4Q6AI14 798 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FAM72DQ6L9T8 149 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 PSAPL1Q6NUJ1 521 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 DRICH1Q6PGQ1 229 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 CCDC137Q6PK04 289 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 NPNTQ6UXI9 565 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SLC36A4Q6YBV0 504 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 RAB44Q7Z6P3 723 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FAM72BQ86X60 149 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 JAMLQ86YT9 394 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 PLD5Q8N7P1 536 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 DDI1Q8WTU0 396 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 HAUS1Q96CS2 278 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SLC39A13Q96H72 371 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FCRL2Q96LA5 508 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 RUNDC3BQ96NL0 473 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 SERPINB11Q96P15 392 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 CSPG4P5Q96PW8 444 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 NUSAP1Q9BXS6 441 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 MAK16Q9BXY0 300 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TKTL2Q9H0I9 626 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 OSBPL2Q9H1P3 480 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 WDCPQ9H6R7 721 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 CD93Q9NPY3 652 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 FSCN3Q9NQT6 498 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 GDF3Q9NR23 364 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 HOMER3Q9NSC5 361 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 OLA1Q9NTK5 396 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 TMEM51Q9NW97 253 aa7.73□□□□□ -1.17
CLDN1-202ENST00000490800 CWC15Q9P013 229 aaKnown RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 RCOR3Q9P2K3 495 aaPredicted RBP7.73□□□□□ -1.17
CLDN1-202ENST00000490800 EVLQ9UI08 416 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms