RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ITGB7	P26010	798 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	CCZ1B	P86790	482 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	CCZ1	P86791	482 aa	Predicted RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	GALNT2	Q10471	571 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ZNF235	Q14590	738 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	WDR45B	Q5MNZ6	344 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	TMCO4	Q5TGY1	634 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	LRRC38	Q5VT99	294 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	SPOCD1	Q6ZMY3	1216 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ERN2	Q76MJ5	926 aa	Known RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	CCDC50	Q8IVM0	306 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	FAM131C	Q96AQ9	280 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ORAI3	Q9BRQ5	295 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	DDX56	Q9NY93	547 aa	Known RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ADGRG1	Q9Y653	693 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	CAPN6	Q9Y6Q1	641 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ZFC3H1	O60293	1989 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	CXorf51A	A0A1B0GTR3	108 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	C16orf96	A6NNT2	1141 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	BTNL10	A8MVZ5	291 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	APOL1	O14791	398 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	WNT9A	O14904	365 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	KHNYN	O15037	678 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	RNGTT	O60942	597 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	PRKCG	P05129	697 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	ADRB3	P13945	408 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	GARS	P41250	739 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	CDKN2B	P42772	138 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	MAPK8	P45983	427 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	NEK3	P51956	506 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SEMG2	Q02383	582 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	ADCY2	Q08462	1091 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SFSWAP	Q12872	951 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	AADACL2	Q6P093	401 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	GDPD4	Q6W3E5	623 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SRL	Q86TD4	932 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	LRRC8A	Q8IWT6	810 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	DNASE2B	Q8WZ79	361 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	HAUS1	Q96CS2	278 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	PPP1R16A	Q96I34	528 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SLC6A18	Q96N87	628 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	EDEM2	Q9BV94	578 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	NT5M	Q9NPB1	228 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	DTL	Q9NZJ0	730 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SAE1	Q9UBE0	346 aa	Predicted RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	CA5B	Q9Y2D0	317 aa		18.81	■□□□□ 0.6
C4A-256	ENST00000490663	CNOT1	A5YKK6	2376 aa	Known RBP	18.81	■□□□□ 0.6
C4A-256	ENST00000490663	SPINT1	O43278	529 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	FTCD	O95954	541 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	PRLR	P16471	622 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	SCNN1B	P51168	640 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	KIF5A	Q12840	1032 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	DUOXA1	Q1HG43	343 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	ZNF805	Q5CZA5	627 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	SEL1L3	Q68CR1	1132 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	SLC9A4	Q6AI14	798 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	FBXL19	Q6PCT2	694 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	ZSWIM9	Q86XI8	627 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	CAMK1D	Q8IU85	385 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	PLPP6	Q8IY26	295 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	LRRC57	Q8N9N7	239 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	C1orf216	Q8TAB5	229 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	HERPUD2	Q9BSE4	406 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	GTPBP2	Q9BX10	602 aa	Known RBP	18.8	■□□□□ 0.6
C4A-256	ENST00000490663	CEP41	Q9BYV8	373 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	TM9SF3	Q9HD45	589 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	FZD3	Q9NPG1	666 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	SEPT3	Q9UH03	358 aa		18.8	■□□□□ 0.6
C4A-256	ENST00000490663	ARHGAP6	O43182	974 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	SLC7A4	O43246	635 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	PCDH8	O95206	1070 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	PECAM1	P16284	738 aa	Predicted RBP	18.79	■□□□□ 0.6
C4A-256	ENST00000490663	ENG	P17813	658 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	MMP13	P45452	471 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	BNC1	Q01954	994 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	RAD51	Q06609	339 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	RSPO4	Q2I0M5	234 aa	Predicted RBP	18.79	■□□□□ 0.6
C4A-256	ENST00000490663	KATNAL2	Q8IYT4	538 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	CCNY	Q8ND76	341 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	KIAA1524	Q8TCG1	905 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	LGMN	Q99538	433 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	HEMGN	Q9BXL5	484 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	NUSAP1	Q9BXS6	441 aa	Known RBP	18.79	■□□□□ 0.6
C4A-256	ENST00000490663	MAK16	Q9BXY0	300 aa	Known RBP	18.79	■□□□□ 0.6
C4A-256	ENST00000490663	HDAC8	Q9BY41	377 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	PCED1A	Q9H1Q7	454 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	CAPN10	Q9HC96	672 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	GUCA1B	Q9UMX6	200 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	ZFR2	Q9UPR6	939 aa	Known RBP	18.79	■□□□□ 0.6
C4A-256	ENST00000490663	TTLL3	Q9Y4R7	772 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	PCNX2	A6NKB5	2137 aa		18.79	■□□□□ 0.6
C4A-256	ENST00000490663	DCHS1	Q96JQ0	3298 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	hCG_1818297	A0A087WSY0	165 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663		A0A1B0GTW7	788 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663		A0A1B0GVT2	93 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663		A0A1W2PQU0	124 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	C10orf142	B7Z368	130 aa		18.78	■□□□□ 0.6
C4A-256	ENST00000490663	BCAT2	O15382	392 aa	Predicted RBP	18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms