RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PTPN9P43378 593 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ABCG1P45844 678 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 RABIFP47224 123 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 IRAK1P51617 712 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 METAP1P53582 386 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 AIF1P55008 147 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 SNRPD1P62314 119 aaKnown RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 OGDHQ02218 1023 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 DNAJC3Q13217 504 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 SGCGQ13326 291 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 TRIM14Q14142 442 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ACAP1Q15027 740 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 COL28A1Q2UY09 1125 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 PROX2Q3B8N5 592 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 POM121L1PQ3SYA9 428 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 CCDC122Q5T0U0 273 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 PLEKHA7Q6IQ23 1121 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 KYAT3Q6YP21 454 aaKnown RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 KANSL1Q7Z3B3 1105 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 VPS36Q86VN1 386 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 LSMEM2Q8N112 164 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 DENND6BQ8NEG7 585 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 FAM172AQ8WUF8 416 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 GRAMD1AQ96CP6 724 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 LENG8Q96PV6 779 aaPredicted RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 CHP1Q99653 195 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 C1QTNF7Q9BXJ2 289 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 CALN1Q9BXU9 219 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 SLC17A9Q9BYT1 436 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 TRIM7Q9C029 511 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 PARVAQ9NVD7 372 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 BAHCC1Q9P281 2608 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 MYO1AQ9UBC5 1043 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 CSNK1G3Q9Y6M4 447 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 TDRD6O60522 2096 aaKnown RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 ITPR1Q14643 2758 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ASXL3Q9C0F0 2248 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 MYLKQ15746 1914 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 FAM149AA5PLN7 773 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TMEM191CA6NGB0 347 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 AKR1B15C9JRZ8 316 aaPredicted RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 K7ERQ8 282 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 PLK4O00444 970 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 NEMP1O14524 444 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 FPGTO14772 594 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 CCP110O43303 1012 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 SMAD6O43541 496 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 MFAP3LO75121 409 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ZMPSTE24O75844 475 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 PIAS2O75928 621 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 POP4O95707 220 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 GSRP00390 522 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TPM1P09493 284 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 CKMT1AP12532 417 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 GLDCP23378 1020 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ACTN2P35609 894 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 NUMBP49757 651 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 DNA2P51530 1060 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 SUOXP51687 545 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 CCNHP51946 323 aaPredicted RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 HDAC4P56524 1084 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
TTC28-207ENST00000490475 PTK2BQ14289 1009 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 GRM3Q14832 879 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 ZNF805Q5CZA5 627 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ARTNQ5T4W7 220 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 RWDD4Q6NW29 188 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 C19orf48Q6RUI8 117 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 LINGO4Q6UY18 593 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 DCBLD1Q8N8Z6 715 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 FAM181AQ8N9Y4 354 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 OR7D4Q8NG98 312 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 BTN2A2Q8WVV5 523 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 NTAN1Q96AB6 310 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ARRDC3Q96B67 414 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ZNF653Q96CK0 615 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TBC1D31Q96DN5 1066 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 CNPY3Q9BT09 278 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ABHD10Q9NUJ1 306 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 TMEM248Q9NWD8 314 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 ZNHIT6Q9NWK9 470 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 IPO11Q9UI26 975 aaKnown RBP10.53□□□□□ -0.72
TTC28-207ENST00000490475 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
TTC28-207ENST00000490475 NBEAQ8NFP9 2946 aa10.52□□□□□ -0.72
TTC28-207ENST00000490475 FAM72CH0Y354 149 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms