RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PTK2BQ14289 1009 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 CCDC40Q4G0X9 1142 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 RETSATQ6NUM9 610 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 TTI2Q6NXR4 508 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 CRTC1Q6UUV9 634 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 LINGO4Q6UY18 593 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 ATG14Q6ZNE5 492 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 C11orf57Q6ZUT1 292 aaPredicted RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 PARS2Q7L3T8 475 aaKnown RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 ENOSF1Q7L5Y1 443 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 PHACTR4Q8IZ21 702 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 RBFAQ8N0V3 343 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 WDTC1Q8N5D0 677 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 NT5C3BQ969T7 300 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 ISG20Q96AZ6 181 aaKnown RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 CENPTQ96BT3 561 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 PGAP3Q96FM1 320 aaPredicted RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 PPP1R13BQ96KQ4 1090 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 C1orf74Q96LT6 269 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 NPY6RQ99463 290 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 HEPHQ9BQS7 1158 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 LRRC61Q9BV99 259 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 INTS2Q9H0H0 1204 aaKnown RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 TNKS2Q9H2K2 1166 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 ANLNQ9NQW6 1124 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 PIGVQ9NUD9 493 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 COX16Q9P0S2 106 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 ZNF212Q9UDV6 495 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 IPO11Q9UI26 975 aaKnown RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 PNMA8BQ9ULN7 279 aaPredicted RBP8.34□□□□□ -1.07
USP39-216ENST00000490193 PADI4Q9UM07 663 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 ZDHHC9Q9Y397 364 aa8.34□□□□□ -1.07
USP39-216ENST00000490193 DOPEY2Q9Y3R5 2298 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 IGLON5A6NGN9 336 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 BECN2A8MW95 431 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 D6RAR5 112 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 M0QYT0 321 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 AREL1O15033 823 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 NVLO15381 856 aaKnown RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 GRAP2O75791 330 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 SMC2O95347 1197 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 GJB6O95452 261 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ADCY5O95622 1261 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ANXA6P08133 673 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 LIPCP11150 499 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 UGT1A5P35504 534 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 IGFALSP35858 605 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ABL2P42684 1182 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 CCNHP51946 323 aaPredicted RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 THOP1P52888 689 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ADKP55263 362 aaKnown RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 PRR20EP86478 221 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 PRR20CP86479 221 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 PRR20DP86480 221 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 PRR20BP86481 221 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 PRR20AP86496 221 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 SGCGQ13326 291 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 STIM1Q13586 685 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 LRRK1Q38SD2 2015 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 CARD16Q5EG05 197 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 COLEC12Q5KU26 742 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ESRP1Q6NXG1 681 aaKnown RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 FOXR1Q6PIV2 292 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 LVRNQ6Q4G3 990 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 MACC1Q6ZN28 852 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 FAM183BPQ6ZVS7 135 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 USP53Q70EK8 1073 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 RAB11FIP2Q7L804 512 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 B3GNT8Q7Z7M8 397 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 SDR16C5Q8N3Y7 309 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 FBXO39Q8N4B4 442 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ARL10Q8N8L6 244 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 OR7D4Q8NG98 312 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 SMARCE1Q969G3 411 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 VOPP1Q96AW1 172 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 ARHGEF26Q96DR7 871 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 FAM81BQ96LP2 452 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 CLPBQ9H078 707 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 TKTL2Q9H0I9 626 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 SIK2Q9H0K1 926 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 TCEAL2Q9H3H9 227 aaPredicted RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 UBE2TQ9NPD8 197 aaPredicted RBP8.33□□□□□ -1.08
USP39-216ENST00000490193 ACP6Q9NPH0 428 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 PAXBP1Q9Y5B6 917 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 LRRK2Q5S007 2527 aa8.33□□□□□ -1.08
USP39-216ENST00000490193 UNC13CQ8NB66 2214 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 C16orf96A6NNT2 1141 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 YY2O15391 372 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 GNA14O95837 355 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 CD160O95971 181 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 F9P00740 461 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 AFPP02771 609 aaKnown RBP8.32□□□□□ -1.08
USP39-216ENST00000490193 ERBB2P04626 1255 aa8.32□□□□□ -1.08
USP39-216ENST00000490193 NTRK1P04629 796 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms