RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CHID1Q9BWS9 393 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NOL11Q9H8H0 719 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 WDR41Q9HAD4 459 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SMOXQ9NWM0 555 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF221Q9UK13 617 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NUP50Q9UKX7 468 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CFL2Q9Y281 166 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CAB39Q9Y376 341 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SNX13Q9Y5W8 968 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 LAMB1P07942 1786 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GAKO14976 1311 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MN1Q10571 1320 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MARF1Q9Y4F3 1742 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 DOCK2Q92608 1830 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TCRBV9S1A1TA0A576 114 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TCRBV3S1A0A5B6 114 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SAGE2PA6NJ88 616 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SAC3D1A6NKF1 404 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GOLGA8SH3BPF8 625 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM77I1YAP6 450 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SGK1O00141 431 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PMM2O15305 246 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RAD51BO15315 384 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CFLARO15519 480 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZBTB14O43829 449 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 UGT2B11O75310 529 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 AVILO75366 819 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 B3GALNT1O75752 331 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PIAS1O75925 651 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ALDH1A2O94788 518 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MFN2O95140 757 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NDST3O95803 873 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GNAO1P09471 354 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PHKG2P15735 406 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RHOQP17081 205 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GLDCP23378 1020 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 IL12AP29459 219 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PTPN7P35236 360 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ECE1P42892 770 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CRKP46108 304 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC9A3P48764 834 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 HARS2P49590 506 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MFAP3P55082 362 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PKNOX1P55347 436 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MPP1Q00013 466 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TNFAIP2Q03169 654 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CLCQ05315 142 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FSTL1Q12841 308 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ALCAMQ13740 583 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 STK11Q15831 433 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NEDD8Q15843 81 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 HIST2H2ACQ16777 129 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 DGUOKQ16854 277 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF181Q2M3W8 571 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ARSJQ5FYB0 599 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PAGE2BQ5JRK9 111 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 LDLRAP1Q5SW96 308 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BROXQ5VW32 411 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM205BPQ63HN1 556 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PDE12Q6L8Q7 609 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF544Q6NX49 715 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SYCE2Q6PIF2 218 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CRTC3Q6UUV7 619 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ADGRA1Q86SQ6 560 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 LINC00523Q86TU6 105 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZBTB46Q86UZ6 589 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SNX32Q86XE0 403 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GALNT12Q8IXK2 581 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NDUFAF2Q8N183 169 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SCML4Q8N228 414 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FBXL6Q8N531 539 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 LINC00469Q8N7U9 141 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ANKRD53Q8N9V6 530 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TDRD5Q8NAT2 981 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CMASQ8NFW8 434 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RHOXF1Q8NHV9 184 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NPLOC4Q8TAT6 608 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZFP90Q8TF47 636 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 JPH3Q8WXH2 748 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SEPT8Q92599 483 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FKBP10Q96AY3 582 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ANAPC16Q96DE5 110 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GIMAP5Q96F15 307 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 DCAF5Q96JK2 942 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 REEP2Q9BRK0 252 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TMEM246Q9BRR3 403 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FRMD8P1Q9BZ68 369 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SUV39H2Q9H5I1 410 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GREM2Q9H772 168 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ANKHQ9HCJ1 492 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM39Q9HCM9 518 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 POLMQ9NP87 494 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 NDFIP2Q9NV92 336 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms