RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CAPN6Q9Y6Q1 641 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 FRYLO94915 3013 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 CEP192Q8TEP8 1941 aa11.23□□□□□ -0.61
CPSF7-212ENST00000489728 MEI4A8MW99 385 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 PRR5-ARHGAP8B1AHC4 643 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 APOC4-APOC2K7ER74 178 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 LATO43561 262 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 CST8O60676 142 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 SOCS5O75159 536 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 APOC2P02655 101 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF806P0C7X5 589 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ADRB3P13945 408 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 CR2P20023 1033 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 SERPINA4P29622 427 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 PTGER3P43115 390 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 CREB5Q02930 508 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 SLC10A7Q0GE19 358 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 CNTN1Q12860 1018 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 LPAL2Q16609 132 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ATXN7L2Q5T6C5 722 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 KIAA0895LQ68EN5 471 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 GPR179Q6PRD1 2367 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 SRLQ86TD4 932 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 FAM124AQ86V42 546 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 TRIM69Q86WT6 500 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 TP53INP2Q8IXH6 220 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 OR14C36Q8NHC7 312 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ALG3Q92685 438 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 P3H4Q92791 437 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 VOPP1Q96AW1 172 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 POLR1EQ9GZS1 481 aaKnown RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 HEY1Q9Y5J3 304 aa11.22□□□□□ -0.61
CPSF7-212ENST00000489728 ZFHX2Q9C0A1 2572 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-212ENST00000489728 USP34Q70CQ2 3546 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 C16orf96A6NNT2 1141 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 HACD1B0YJ81 288 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 TJP3O95049 919 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 UGT2B4P06133 528 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 CCNB1P14635 433 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 GNSP15586 552 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 CD27P26842 260 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 BCL2L1Q07817 233 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 XRCC4Q13426 336 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 DUOXA1Q1HG43 343 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 DCAF12L1Q5VU92 463 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 KIAA1161Q6NSJ0 714 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 FBXL19Q6PCT2 694 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 NCEH1Q6PIU2 408 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.21□□□□□ -0.61
CPSF7-212ENST00000489728 PARS2Q7L3T8 475 aaKnown RBP11.21□□□□□ -0.61
CPSF7-212ENST00000489728 CCNYQ8ND76 341 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 OR6K2Q8NGY2 324 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 ARRDC3Q96B67 414 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 ECHDC3Q96DC8 303 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 ARRDC1-AS1Q9H2J1 176 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 LZTFL1Q9NQ48 299 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
CPSF7-212ENST00000489728 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.62
CPSF7-212ENST00000489728 MUSKO15146 869 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 INSIG1O15503 277 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 DDX3YO15523 660 aaKnown RBP11.2□□□□□ -0.62
CPSF7-212ENST00000489728 TSPAN6O43657 245 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 NEBLO76041 1014 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 FTCDO95954 541 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 IGHV4-34P06331 123 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 KRT10P13645 584 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 CA4P22748 312 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 ITPKAP23677 461 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 NFKBIAP25963 317 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 RGRP47804 291 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 METAP1P53582 386 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 TAS2R38P59533 333 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 POLR2LP62875 67 aaKnown RBP11.2□□□□□ -0.62
CPSF7-212ENST00000489728 DYNLT1P63172 113 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 LMNB2Q03252 620 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 ELP6Q0PNE2 266 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SLC14A2Q15849 920 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 CFAP58Q5T655 872 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 KAZNQ674X7 775 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 SLC23A3Q6PIS1 610 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 TTC13Q8NBP0 860 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 TFB1MQ8WVM0 346 aaKnown RBP11.2□□□□□ -0.62
CPSF7-212ENST00000489728 ASB12Q8WXK4 309 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 BIRC7Q96CA5 298 aa11.2□□□□□ -0.62
CPSF7-212ENST00000489728 EXOC2Q96KP1 924 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms