RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 NCSTNQ92542 709 aa3.2□□□□□ -1.9
CPSF3-205ENST00000489629 SCMH1Q96GD3 660 aa3.2□□□□□ -1.9
CPSF3-205ENST00000489629 IL17FQ96PD4 163 aa3.2□□□□□ -1.9
CPSF3-205ENST00000489629 TCF7L2Q9NQB0 619 aa3.2□□□□□ -1.9
CPSF3-205ENST00000489629 TMEM51Q9NW97 253 aa3.2□□□□□ -1.9
CPSF3-205ENST00000489629 SRP68Q9UHB9 627 aaKnown RBP3.2□□□□□ -1.9
CPSF3-205ENST00000489629 VNN2O95498 520 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 IGHV4-30-4P0DP06 118 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 MYF6P23409 242 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 RPL3P39023 403 aaKnown RBP3.19□□□□□ -1.9
CPSF3-205ENST00000489629 CENPAP49450 140 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 MCM2P49736 904 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 RGS19P49795 217 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 RBM5P52756 815 aaKnown RBP eCLIP3.19□□□□□ -1.9
CPSF3-205ENST00000489629 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 DHX34Q14147 1143 aaKnown RBP3.19□□□□□ -1.9
CPSF3-205ENST00000489629 MRGPRG-AS1Q2M3A8 158 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 FBXO43Q4G163 708 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 ZNF484Q5JVG2 852 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 SH2D4BQ5SQS7 431 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 DSTYKQ6XUX3 929 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 ZMIZ2Q8NF64 920 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 CSGALNACT1Q8TDX6 532 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 TBC1D22AQ8WUA7 517 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 SORCS1Q8WY21 1168 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 TRIB2Q92519 343 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 CTDSP1Q9GZU7 261 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 TWSG1Q9GZX9 223 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 TAF1DQ9H5J8 278 aaPredicted RBP3.19□□□□□ -1.9
CPSF3-205ENST00000489629 MALT1Q9UDY8 824 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 CD207Q9UJ71 328 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 NFS1Q9Y697 457 aa3.19□□□□□ -1.9
CPSF3-205ENST00000489629 PRR23AA6NEV1 266 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 FAM155BO75949 473 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 KRT38O76015 456 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 CH25HO95992 272 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 SERPINC1P01008 464 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 IL1AP01583 271 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 VEGFAP15692 232 aaPredicted RBP3.18□□□□□ -1.9
CPSF3-205ENST00000489629 TTKP33981 857 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 PEX5P50542 639 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 HILS1P60008 231 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 DDR1Q08345 913 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 HDAC1Q13547 482 aaPredicted RBP3.18□□□□□ -1.9
CPSF3-205ENST00000489629 CAPSQ13938 189 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 RBM39Q14498 530 aaKnown RBP3.18□□□□□ -1.9
CPSF3-205ENST00000489629 PLEKHO1Q53GL0 409 aaPredicted RBP3.18□□□□□ -1.9
CPSF3-205ENST00000489629 NAPEPLDQ6IQ20 393 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 MON1AQ86VX9 555 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 POC1AQ8NBT0 407 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 LINS1Q8NG48 757 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 SDCCAG3Q96C92 435 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 MASTLQ96GX5 879 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 GRHPRQ9UBQ7 328 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 ADAM18Q9Y3Q7 739 aa3.18□□□□□ -1.9
CPSF3-205ENST00000489629 CPED1A4D0V7 1026 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 HMX3A6NHT5 357 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 IPO5O00410 1097 aaKnown RBP3.17□□□□□ -1.9
CPSF3-205ENST00000489629 PMS2P2O95744 297 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 ADAP00813 363 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 SSTR2P30874 369 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 HNF1BP35680 557 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 CXCR3P49682 368 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 BRWD1-AS2P59051 145 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 BLMHQ13867 455 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 CBWD5Q5RIA9 395 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 SYCP2LQ5T4T6 812 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 JMJD6Q6NYC1 403 aaPredicted RBP3.17□□□□□ -1.9
CPSF3-205ENST00000489629 FBXL22Q6P050 247 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 ZNF449Q6P9G9 518 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 C9orf139Q6ZV77 190 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 NEK10Q6ZWH5 1172 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 EXOC3L1Q86VI1 746 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 DENND6AQ8IWF6 608 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 MB21D2Q8IYB1 491 aaPredicted RBP3.17□□□□□ -1.9
CPSF3-205ENST00000489629 ANKRD44Q8N8A2 993 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 RASSF8Q8NHQ8 419 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 TMEM170AQ8WVE7 144 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 RNF183Q96D59 192 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 RNFT2Q96EX2 444 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 ZNF385AQ96PM9 386 aaKnown RBP3.17□□□□□ -1.9
CPSF3-205ENST00000489629 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 ANKRD10Q9NXR5 420 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 OR6C3Q9NZP0 311 aa3.17□□□□□ -1.9
CPSF3-205ENST00000489629 SLC25A17O43808 307 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 DHX16O60231 1041 aaKnown RBP3.16□□□□□ -1.9
CPSF3-205ENST00000489629 HBP1O60381 514 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE7O76087 117 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 CGAP01215 116 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE12FP0CL80 117 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE12GP0CL81 117 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE12IP0CL82 117 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 AMD1P17707 334 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 CD72P21854 359 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GLIPR1P48060 266 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 ARSFP54793 590 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 ACSM2AQ08AH3 577 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE1Q13065 139 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 GAGE4Q13068 117 aa3.16□□□□□ -1.9
CPSF3-205ENST00000489629 CUL4BQ13620 913 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms