RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ETFBP38117 255 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 GRIA4P48058 902 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 HCAR3P49019 387 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 MAPKAPK2P49137 400 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 CCR5P51681 352 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 LLGL1Q15334 1064 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 WHAMMP3Q1A5X7 153 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 ANKRD20A8PQ5CZ79 823 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 PPP6R3Q5H9R7 873 aaPredicted RBP10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC9A4Q6AI14 798 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 RETSATQ6NUM9 610 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 NCEH1Q6PIU2 408 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 RFX8Q6ZV50 586 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 Q6ZVU0 165 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 AADATQ8N5Z0 425 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 PLD5Q8N7P1 536 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 ATP11CQ8NB49 1132 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 KCTD6Q8NC69 237 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 OR2I1PQ8NGU4 316 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 ACTRT1Q8TDG2 376 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 FAM131CQ96AQ9 280 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 RNF157Q96PX1 679 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 OSBPL8Q9BZF1 889 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 TM9SF3Q9HD45 589 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 ARGLU1Q9NWB6 273 aaPredicted RBP10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 RCOR3Q9P2K3 495 aaPredicted RBP10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 CDC23Q9UJX2 597 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 ANGPTL2Q9UKU9 493 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 PPM1HQ9ULR3 514 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 PI4KAP42356 2102 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 A0A1W2PPC4 97 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CREB3O43889 395 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CEP104O60308 925 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 MT-CO1P00395 513 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 ZNF883P0CG24 379 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CD59P13987 128 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 RHOQP17081 205 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 AMPD1P23109 780 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 DRD3P35462 400 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 ADPRHP54922 357 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 RACK1P63244 317 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 SHC2P98077 582 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 GNA12Q03113 381 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CCDC15Q0P6D6 951 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 TFDP3Q5H9I0 405 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 NCBP2-AS2Q69YL0 99 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 RWDD4Q6NW29 188 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 BBS12Q6ZW61 710 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 ZNF572Q7Z3I7 529 aaPredicted RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC13A5Q86YT5 568 aaPredicted RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 NPWQ8N729 165 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 OR7D4Q8NG98 312 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 OR14C36Q8NHC7 312 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 PIP4K2CQ8TBX8 421 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D31Q96DN5 1066 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 ORAI3Q9BRQ5 295 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 SPON2Q9BUD6 331 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 HEMGNQ9BXL5 484 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CALN1Q9BXU9 219 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CEP44Q9C0F1 390 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 GAREM1Q9H706 876 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 ATP13A1Q9HD20 1204 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 NDFIP2Q9NV92 336 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 TMEM248Q9NWD8 314 aa10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 R3HDM2Q9Y2K5 976 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-208ENST00000489554 CACNA1EQ15878 2313 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 NYNRINQ9P2P1 1898 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 A0A1B0GVT2 93 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 WASH4PA8MWX3 477 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 C10orf142B7Z368 130 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 K7ERQ8 282 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 CBX4O00257 560 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 EEF2KO00418 725 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 PLRG1O43660 514 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 BNIP3LO60238 219 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ZMPSTE24O75844 475 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 FGGP02679 453 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 PRNPP04156 253 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 PECAM1P16284 738 aaPredicted RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ERCC2P18074 760 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 CHRNA3P32297 505 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 HTR7P34969 479 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 NUDT1P36639 197 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 RECQLP46063 649 aaPredicted RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 SERPINH1P50454 418 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ZNF135P52742 658 aaPredicted RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 GEMIN4P57678 1058 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 TPI1P60174 286 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 BNC1Q01954 994 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC10A2Q12908 348 aaPredicted RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 KRT81Q14533 505 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms