RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	RAMP2	O60895	175 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	USP12	O75317	370 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	GSR	P00390	522 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PLEK	P08567	350 aa	Predicted RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	ITIH2	P19823	946 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	RFC1	P35251	1148 aa	Predicted RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	SOX5	P35711	763 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	IGFALS	P35858	605 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PTPN9	P43378	593 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	SNRPD1	P62314	119 aa	Known RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	TLE3	Q04726	772 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PTP4A2	Q12974	167 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	EIF2B5	Q13144	721 aa	Known RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	C1orf61	Q13536	156 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	POLD3	Q15054	466 aa	Predicted RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	KRT31	Q15323	416 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	GUSBP11	Q6P575	273 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	CRTC1	Q6UUV9	634 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	STRADA	Q7RTN6	431 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	VPS36	Q86VN1	386 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PLPP6	Q8IY26	295 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PYROXD2	Q8N2H3	581 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	FAM181A	Q8N9Y4	354 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	MAPK15	Q8TD08	544 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	SLC39A7	Q92504	469 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	RAB7B	Q96AH8	199 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	LGMN	Q99538	433 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	DUSP23	Q9BVJ7	150 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	KLC2	Q9H0B6	622 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	ABCG4	Q9H172	646 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	MAGEH1	Q9H213	219 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	HPCAL4	Q9UM19	191 aa		13.09	□□□□□ -0.31
WDR46-238	ENST00000488944	CASC3	O15234	703 aa	Known RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	BUB1	O43683	1085 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	C1QL1	O75973	258 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	TMCC1	O94876	653 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	POP4	O95707	220 aa	Known RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	GP1BA	P07359	652 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	KRT3	P12035	628 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	UNG	P13051	313 aa	Predicted RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	TGM2	P21980	687 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	DUSP3	P51452	185 aa	Predicted RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	JAM2	P57087	298 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	GEMIN4	P57678	1058 aa	Known RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	PFN3	P60673	137 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	CXADR	P78310	365 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	MYLK3	Q32MK0	819 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	CDKAL1	Q5VV42	579 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	GPR155	Q7Z3F1	870 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	DENND6B	Q8NEG7	585 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	CENPI	Q92674	756 aa	Predicted RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	LENG8	Q96PV6	779 aa	Predicted RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	SELENOO	Q9BVL4	669 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	NOL6	Q9H6R4	1146 aa	Known RBP	13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	EVA1B	Q9NVM1	165 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	ADAM22	Q9P0K1	906 aa		13.08	□□□□□ -0.32
WDR46-238	ENST00000488944	ANKRD36	A6QL64	1941 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	KALRN	O60229	2985 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	HELZ2	Q9BYK8	2649 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	AREL1	O15033	823 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	ATXN7	O15265	892 aa	Predicted RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	INSIG1	O15503	277 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	CCP110	O43303	1012 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	KDELR3	O43731	214 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	MMP20	O60882	483 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	GCAT	O75600	419 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	GPD1	P21695	349 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	NSF	P46459	744 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	THOP1	P52888	689 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	PCBP4	P57723	403 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	TCEA2	Q15560	299 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	PRRT3	Q5FWE3	981 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	C3orf38	Q5JPI3	329 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	PERM1	Q5SV97	790 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	SCYL2	Q6P3W7	929 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	WDR59	Q6PJI9	974 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	GDPD4	Q6W3E5	623 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	TRIM72	Q6ZMU5	477 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	TTC7B	Q86TV6	843 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	ZSCAN30	Q86W11	494 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	PHACTR4	Q8IZ21	702 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	ZNF248	Q8NDW4	579 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	ENOX1	Q8TC92	643 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	ASB12	Q8WXK4	309 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	NTAN1	Q96AB6	310 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	CENPT	Q96BT3	561 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	EXOC2	Q96KP1	924 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	GDAP1L1	Q96MZ0	367 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	IL12RB2	Q99665	862 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	WRAP53	Q9BUR4	548 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	OSBPL1A	Q9BXW6	950 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	USP29	Q9HBJ7	922 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	MBNL1	Q9NR56	388 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	SEPT11	Q9NVA2	429 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	APOBEC3B	Q9UH17	382 aa	Known RBP	13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	SIK3	Q9Y2K2	1263 aa		13.07	□□□□□ -0.32
WDR46-238	ENST00000488944	CSNK1G3	Q9Y6M4	447 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms