RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM160B2Q86V87 743 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 ARMC8Q8IUR7 673 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 PLD5Q8N7P1 536 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 C7orf57Q8NEG2 295 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 ENGASEQ8NFI3 743 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 OR4N2Q8NGD1 307 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 GABPB2Q8TAK5 448 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 BICD2Q8TD16 824 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC35F5Q8WV83 523 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 KAT6BQ8WYB5 2073 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 INPP5DQ92835 1189 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 PDCL3Q9H2J4 239 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 CATSPERBQ9H7T0 1116 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 KRCC1Q9NPI7 259 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 IRAK4Q9NWZ3 460 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 PPP1R14DQ9NXH3 145 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 MAP3K20Q9NYL2 800 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC25A10Q9UBX3 287 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 CAMK2AQ9UQM7 478 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 CYP46A1Q9Y6A2 500 aa4.08□□□□□ -1.76
ECHDC1-217ENST00000488087 RPS10-NUDT3A0A1W2PQS6 291 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 MYMKA6NI61 221 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 CLDN7O95471 211 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 CRYABP02511 175 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC2A4P14672 509 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 FMO4P31512 558 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 GEMIN4P57678 1058 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC18A2Q05940 514 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 VEPH1Q14D04 833 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 TAF11Q15544 211 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 TWIST1Q15672 202 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 SERTAD4-AS1Q5TG53 156 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 DCAF12L2Q5VW00 463 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 ACAD10Q6JQN1 1059 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 CES5AQ6NT32 575 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 TMEM81Q6P7N7 255 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 FAM83HQ6ZRV2 1179 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 TADA2BQ86TJ2 420 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 C11orf65Q8NCR3 313 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 ZMIZ2Q8NF64 920 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 RFFLQ8WZ73 363 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 HDAC2Q92769 488 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 RNF183Q96D59 192 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 NAF1Q96HR8 494 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 AGXT2Q9BYV1 514 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 NUF2Q9BZD4 464 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 RBM38Q9H0Z9 239 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 SLC25A18Q9H1K4 315 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 KLHL31Q9H511 634 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 SNTG1Q9NSN8 517 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 KIAA1456Q9P272 454 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 CTNNAL1Q9UBT7 734 aa4.07□□□□□ -1.76
ECHDC1-217ENST00000488087 RSF1Q96T23 1441 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 RNF123Q5XPI4 1314 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 B4E171 279 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SPTLC2O15270 562 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 ATP2C2O75185 946 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TACC1O75410 805 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 F9P00740 461 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 GALTP07902 379 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TPM2P07951 284 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 FGF2P09038 288 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TFPIP10646 304 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 PCNAP12004 261 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 COX7A2P14406 83 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CTPS1P17812 591 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TNFAIP3P21580 790 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CDC25AP30304 524 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TSPAN7P41732 249 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 KCNJ4P48050 445 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 RASSF2P50749 326 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CCT4P50991 539 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CLCN5P51795 746 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CASP6P55212 293 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 P2RX3P56373 397 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SELENOVP59797 346 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CYP4A11Q02928 519 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CAPSQ13938 189 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SIM2Q14190 667 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 DUSP6Q16828 381 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 ZNF260Q3ZCT1 412 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 OTUD1Q5VV17 481 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 DAB2IPQ5VWQ8 1189 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 ATG9BQ674R7 924 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TBC1D26Q86UD7 250 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 GPAT4Q86UL3 456 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 KIAA2013Q8IYS2 634 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 CADM3Q8N126 398 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 NFKBIDQ8NI38 313 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 SCARB1Q8WTV0 552 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 TMEM18Q96B42 140 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 ZC3HAV1LQ96H79 300 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 VCPIP1Q96JH7 1222 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 APOLD1Q96LR9 279 aa4.06□□□□□ -1.76
ECHDC1-217ENST00000488087 KLHL15Q96M94 604 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms