RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 RPE65Q16518 533 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 CALCRLQ16602 461 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 PLEKHO1Q53GL0 409 aaPredicted RBP4.12□□□□□ -1.75
CCDC66-221ENST00000487739 ZNF771Q7L3S4 317 aaPredicted RBP4.12□□□□□ -1.75
CCDC66-221ENST00000487739 DCUN1D3Q8IWE4 304 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 PGBD5Q8N414 524 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 AADATQ8N5Z0 425 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 MCPH1Q8NEM0 835 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 SECTM1Q8WVN6 248 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 TRIB2Q92519 343 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 GOLGA1Q92805 767 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 KTI12Q96EK9 354 aaPredicted RBP4.12□□□□□ -1.75
CCDC66-221ENST00000487739 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
CCDC66-221ENST00000487739 OR1F2PQ96R84 312 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 MMTAG2Q9BU76 263 aaKnown RBP4.12□□□□□ -1.75
CCDC66-221ENST00000487739 HERC2P3Q9BVR0 1158 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 G6PC2Q9NQR9 355 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 ATP8A2Q9NTI2 1148 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 NLKQ9UBE8 527 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 CLDN16Q9Y5I7 305 aa4.12□□□□□ -1.75
CCDC66-221ENST00000487739 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 TULP2O00295 520 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 LMX1BO60663 402 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 VNN2O95498 520 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 AFPP02771 609 aaKnown RBP4.11□□□□□ -1.75
CCDC66-221ENST00000487739 IGHV4-30-4P0DP06 118 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 GOLGA8FQ08AF8 430 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 HDAC1Q13547 482 aaPredicted RBP4.11□□□□□ -1.75
CCDC66-221ENST00000487739 ME3Q16798 604 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 C9orf139Q6ZV77 190 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 DENND6AQ8IWF6 608 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 MB21D2Q8IYB1 491 aaPredicted RBP4.11□□□□□ -1.75
CCDC66-221ENST00000487739 ZMIZ2Q8NF64 920 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 OR6Y1Q8NGX8 325 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 RASSF8Q8NHQ8 419 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 WBP2Q969T9 261 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 RNF183Q96D59 192 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 SCMH1Q96GD3 660 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 TAF1DQ9H5J8 278 aaPredicted RBP4.11□□□□□ -1.75
CCDC66-221ENST00000487739 PCDHAC2Q9Y5I4 1007 aa4.11□□□□□ -1.75
CCDC66-221ENST00000487739 NPIPB11E5RHQ5 1161 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 KRT38O76015 456 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE7O76087 117 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 CSTBP04080 98 aaKnown RBP4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE12FP0CL80 117 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE12GP0CL81 117 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE12IP0CL82 117 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 TNNT1P13805 278 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 DGKAP23743 735 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 PTPN9P43378 593 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 ECT2LQ008S8 904 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 SLC18A2Q05940 514 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 FOXO1Q12778 655 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE1Q13065 139 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GAGE4Q13068 117 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 CAPSQ13938 189 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
CCDC66-221ENST00000487739 STPG1Q5TH74 334 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GJB7Q6PEY0 223 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 CCDC129Q6ZRS4 1044 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 TOGARAM2Q6ZUX3 1019 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 GHDCQ8N2G8 530 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 SETD9Q8NE22 299 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 SORCS1Q8WY21 1168 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 LRFN5Q96NI6 719 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 UHRF2Q96PU4 802 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 CRB3Q9BUF7 120 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 EVA1AQ9H8M9 152 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 OR6C3Q9NZP0 311 aa4.1□□□□□ -1.75
CCDC66-221ENST00000487739 KIF26BQ2KJY2 2108 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 ABHD14A-ACY1A0A1B0GW23 586 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 PLIN1O60240 522 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 SERPINC1P01008 464 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 CST5P28325 142 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-221ENST00000487739 SERPINB3P29508 390 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 CENPAP49450 140 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 TROAPQ12815 778 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 BLMHQ13867 455 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 SETMARQ53H47 684 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-221ENST00000487739 FAM69BQ5VUD6 431 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 TUBA1AQ71U36 451 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 MON1AQ86VX9 555 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 CACNA2D3Q8IZS8 1091 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 CD101Q93033 1021 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 FEM1CQ96JP0 617 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 TUBA1CQ9BQE3 449 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 NPLQ9BXD5 320 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-221ENST00000487739 CTDSP1Q9GZU7 261 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 ENTPD7Q9NQZ7 604 aa4.09□□□□□ -1.75
CCDC66-221ENST00000487739 SPATS2LQ9NUQ6 558 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms