RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DPP6P42658 865 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ENTPD1P49961 510 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 CLNS1AP54105 237 aaKnown RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 RARSP54136 660 aaKnown RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ARSFP54793 590 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZBTB16Q05516 673 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 KRT81Q14533 505 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SMTNL2Q2TAL5 461 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ENTPD8Q5MY95 495 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC9C2Q5TAH2 1124 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 HMBOX1Q6NT76 420 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMEM81Q6P7N7 255 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 CPLX4Q7Z7G2 160 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SERPINA11Q86U17 422 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM160B2Q86V87 743 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ARFGAP1Q8N6T3 406 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ETNPPLQ8TBG4 499 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 GDPD5Q8WTR4 605 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SMARCE1Q969G3 411 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ELP4Q96EB1 424 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 PHF7Q9BWX1 381 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 LMAN2LQ9H0V9 348 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC25A18Q9H1K4 315 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 RANBP17Q9H2T7 1088 aaKnown RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF304Q9HCX3 659 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 MLXIPLQ9NP71 852 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 DIAPH3Q9NSV4 1193 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SEL1LQ9UBV2 794 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC25A10Q9UBX3 287 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 SARDHQ9UL12 918 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 CAMK2AQ9UQM7 478 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 MST1RQ04912 1400 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 LRRC53A6NM62 1247 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 B4E171 279 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 EIF3CLB5ME19 914 aaKnown RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 SPTLC2O15270 562 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TLX3O43711 291 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 UNGP13051 313 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 ENO3P13929 434 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 PTPN2P17706 415 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TNFAIP3P21580 790 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 ARL3P36405 182 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TSPAN7P41732 249 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 GABRB2P47870 512 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 CCR9P51686 369 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 UFM1P61960 85 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 SRSF1Q07955 248 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 LMOD3Q0VAK6 560 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 MTX1Q13505 466 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TAF11Q15544 211 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 RPE65Q16518 533 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 HIST2H2ACQ16777 129 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 DCAF6Q58WW2 860 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 WDR78Q5VTH9 848 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 HEPHL1Q6MZM0 1159 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 INO80CQ6PI98 192 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 R3HCC1LQ7Z5L2 792 aaKnown RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 ADHFE1Q8IWW8 467 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM217AQ8IXS0 508 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 DCP1BQ8IZD4 617 aaKnown RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 PELI3Q8N2H9 469 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 HORMAD2Q8N7B1 307 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 WIPF2Q8TF74 440 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMEM170AQ8WVE7 144 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 RNF183Q96D59 192 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZC3HAV1LQ96H79 300 aaKnown RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 MPHOSPH8Q99549 860 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 H2AFJQ9BTM1 129 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 AGXT2Q9BYV1 514 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 FRMD8Q9BZ67 464 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 SPATS2LQ9NUQ6 558 aaKnown RBP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 KIAA1456Q9P272 454 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TBC1D14Q9P2M4 693 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 CARD8Q9Y2G2 431 aa3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P36-201ENST00000487709 TRBV5-7A0A0A0MS05 114 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 LACTBL1A8MY62 500 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 FAM157AC9JC47 383 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 F5H0A9 414 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 MDM4O15151 490 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 SEC14L2O76054 403 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 TBX18O95935 607 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 WNT1P04628 370 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 GALTP07902 379 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 TFPIP10646 304 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ATP1A3P13637 1013 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 PSMA4P25789 261 aaKnown RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 PTPN9P43378 593 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 TUBP50607 506 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 NR1H2P55055 460 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 PPP2R5BQ15173 497 aa3.96□□□□□ -1.78
HMGB1P36-201ENST00000487709 ME3Q16798 604 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms