RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CCDC134Q9H6E4 229 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 TLE6Q9H808 572 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 TREX1Q9NSU2 369 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 INTS9Q9NV88 658 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 IL1RAPL1Q9NZN1 696 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 VPS28Q9UK41 221 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 PSAT1Q9Y617 370 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 FAM47DPA6NHR8 397 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 TRIM49D1C9J1S8 452 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 KRT37O76014 449 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 TMCC1O94876 653 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SERPINF2P08697 491 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SNRPAP09012 282 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 ERVK-10P10266 1014 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 ADRA1DP25100 572 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 CNTFP26441 200 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 WEE1P30291 646 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SERPINH1P50454 418 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 PLK1P53350 603 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SIRPB2Q5JXA9 342 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 LINGO4Q6UY18 593 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 PACS1Q6VY07 963 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 TPGS1Q6ZTW0 290 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 KDELC2Q7Z4H8 507 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 RASSF3Q86WH2 238 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 BANPQ8N9N5 519 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SMG7Q92540 1137 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 ALKBH8Q96BT7 664 aaKnown RBP9.55□□□□□ -0.88
SF3B1-211ENST00000487698 MTBPQ96DY7 904 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SERAC1Q96JX3 654 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 NUDCD1Q96RS6 583 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 MCMBPQ9BTE3 642 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 SFXN1Q9H9B4 322 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 NOD2Q9HC29 1040 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 KCNK9Q9NPC2 374 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 PLK2Q9NYY3 685 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 ZFATQ9P243 1243 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 LHX3Q9UBR4 397 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 MSRAQ9UJ68 235 aa9.55□□□□□ -0.88
SF3B1-211ENST00000487698 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 CXorf51AA0A1B0GTR3 108 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 HEATR9A2RTY3 570 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 INSIG1O15503 277 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 SPAG7O75391 227 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 KRT38O76015 456 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 FGF1P05230 155 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 HLA-DPA1P20036 260 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 CES1P23141 567 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 ARNTP27540 789 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 ARCN1P48444 511 aaKnown RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 SLC18A2Q05940 514 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 CDK18Q07002 472 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 LMAN2Q12907 356 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 TEDDM1Q5T9Z0 273 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 PDPK2PQ6A1A2 396 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 KCNMB4Q86W47 210 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 APCDD1Q8J025 514 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 CNPY4Q8N129 248 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 SLC25A41Q8N5S1 370 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 ITFG1Q8TB96 612 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 ING5Q8WYH8 240 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 ACDQ96AP0 544 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 SGSM3Q96HU1 749 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 EPN3Q9H201 632 aa9.54□□□□□ -0.88
SF3B1-211ENST00000487698 PPANQ9NQ55 473 aaKnown RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 KIAA1522Q9P206 1035 aaPredicted RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 INTS6Q9UL03 887 aaKnown RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 MRPS23Q9Y3D9 190 aaKnown RBP9.54□□□□□ -0.88
SF3B1-211ENST00000487698 MROH6A6NGR9 719 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 RFPL1O75677 317 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 PAPSS2O95340 614 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 MT-ND3P03897 115 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CYBBP04839 570 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CD70P32970 193 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 GP5P40197 560 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CCNFP41002 786 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 NSUN2Q08J23 767 aaKnown RBP eCLIP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SLC12A1Q13621 1099 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 BMPR2Q13873 1038 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 PLEKHG6Q3KR16 790 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 KIAA0930Q6ICG6 404 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 TIFABQ6ZNK6 161 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 TMEM25Q86YD3 366 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ARID3BQ8IVW6 561 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CNTN4Q8IWV2 1026 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ANKRD42Q8N9B4 389 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 OTUB2Q96DC9 234 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 EXOC2Q96KP1 924 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CDCA3Q99618 268 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CPNE1Q99829 537 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 TDRD1Q9BXT4 1180 aaKnown RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 C20orf96Q9NUD7 363 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 MKS1Q9NXB0 559 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 NKIRAS1Q9NYS0 192 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms