RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 UGT2B4P06133 528 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 ALPPL2P10696 532 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 ITIH2P19823 946 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 RABIFP47224 123 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 PFN3P60673 137 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 HNRNPKP61978 463 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS16-208ENST00000487461 SNRPD1P62314 119 aaKnown RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 EIF2B5Q13144 721 aaKnown RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 PDE1CQ14123 709 aaPredicted RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 CDCP2Q5VXM1 449 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 TTC7BQ86TV6 843 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 ZSCAN30Q86W11 494 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 FAM181AQ8N9Y4 354 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 C3orf20Q8ND61 904 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 NEK11Q8NG66 645 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 AGPAT1Q99943 283 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
VPS16-208ENST00000487461 PCDHB1Q9Y5F3 818 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 IGSF10Q6WRI0 2623 aa12.38□□□□□ -0.43
VPS16-208ENST00000487461 LGALS16A8MUM7 142 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 AREL1O15033 823 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 CCP110O43303 1012 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 MMP20O60882 483 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 TMCC1O94876 653 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 CALB1P05937 261 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 NME1P15531 152 aaKnown RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 TIMP2P16035 220 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 EPHB2P29323 1055 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ABCG1P45844 678 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ZNF143P52747 638 aaPredicted RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 UBXN1Q04323 297 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 GDPD4Q6W3E5 623 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 PARGQ86W56 976 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 ZNF548Q8NEK5 533 aaPredicted RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 BAP1Q92560 729 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 FGF11Q92914 225 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ANP32EQ9BTT0 268 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 DUSP23Q9BVJ7 150 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 TTYH3Q9C0H2 523 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 HSD3B7Q9H2F3 369 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
VPS16-208ENST00000487461 FZD10Q9ULW2 581 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 CSNK1G3Q9Y6M4 447 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 CHD5Q8TDI0 1954 aa12.37□□□□□ -0.43
VPS16-208ENST00000487461 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 WASH4PA8MWX3 477 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 RASA4BC9J798 803 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 INSIG1O15503 277 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 RASA4O43374 803 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 CREB3O43889 395 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 GP1BAP07359 652 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 JUNDP17535 347 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 CDK11BP21127 795 aaKnown RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 DUSP3P51452 185 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 YBEYP58557 167 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 NCAPHQ15003 741 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 CYTH1Q15438 398 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 EFHC2Q5JST6 749 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 APTXQ7Z2E3 356 aaKnown RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 LMX1AQ8TE12 382 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 OSBPL1AQ9BXW6 950 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 PRORYQ9H606 182 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 USP29Q9HBJ7 922 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 ANO10Q9NW15 660 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 PNMA8BQ9ULN7 279 aaPredicted RBP12.36□□□□□ -0.43
VPS16-208ENST00000487461 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
VPS16-208ENST00000487461 CPED1A4D0V7 1026 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 H3BM21 787 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
VPS16-208ENST00000487461 AQP9O43315 295 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 GCATO75600 419 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 TM7SF2O76062 418 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 IGSF6O95976 241 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 ACTN2P35609 894 aa12.35□□□□□ -0.43
VPS16-208ENST00000487461 IGFALSP35858 605 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms