RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 KBTBD6Q86V97 674 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 SLC26A7Q8TE54 656 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PYDC1Q8WXC3 89 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 LENG8Q96PV6 779 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 MAN1C1Q9NR34 630 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 IPO11Q9UI26 975 aaKnown RBP26.4■■□□□ 1.82
HLA-C-208ENST00000487245 PCDHB5Q9Y5E4 795 aa26.4■■□□□ 1.82
HLA-C-208ENST00000487245 LOC100653049A0A140TA62 436 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 RGSL1A5PLK6 1076 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 SYN3O14994 580 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 GRID2O43424 1007 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 PEX1O43933 1283 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 KRT34O76011 436 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 MOCS2O96007 188 aaPredicted RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 HLA-DQB2P05538 268 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 LYNP07948 512 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 F7P08709 466 aaPredicted RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 PIM1P11309 404 aaPredicted RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 GABRB3P28472 473 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 ACLYP53396 1101 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 C14orf80Q86SX3 495 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 UMODL1-AS1Q8N2C9 162 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 RP9Q8TA86 221 aaKnown RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 FAM193BQ96PV7 902 aaPredicted RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 FSD1LQ9BXM9 530 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 CYP4F11Q9HBI6 524 aa26.39■■□□□ 1.82
HLA-C-208ENST00000487245 CPSF2Q9P2I0 782 aaKnown RBP26.39■■□□□ 1.82
HLA-C-208ENST00000487245 TK2O00142 265 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 AHCYL1O43865 530 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 PIGNO95427 931 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 AHSGP02765 367 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 FESP07332 822 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 CHRNGP07510 517 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 RHOQP17081 205 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 OR1G1P47890 313 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 TBX4P57082 545 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 NSUN2Q08J23 767 aaKnown RBP eCLIP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 POU6F1Q14863 301 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 CLLU1OSQ5K130 101 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 LRRC8EQ6NSJ5 796 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 C16orf89Q6UX73 402 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 RANBP10Q6VN20 620 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 ACAD11Q709F0 780 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 CENPLQ8N0S6 344 aaPredicted RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 SHCBP1LQ9BZQ2 653 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 KLHL4Q9C0H6 718 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 FAM192AQ9GZU8 254 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 SLC25A51Q9H1U9 297 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 SPATS2LQ9NUQ6 558 aaKnown RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 RUVBL2Q9Y230 463 aaKnown RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 ACOT9Q9Y305 439 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 FRMPD3Q5JV73 1810 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 TMEM88BA6NKF7 163 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 ARCN1P48444 511 aaKnown RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 RENBPP51606 427 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 RAB10P61026 200 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 LSM12Q3MHD2 195 aaKnown RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 ARL13AQ5H913 290 aaPredicted RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 MAP3K21Q5TCX8 1036 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 KIAA0930Q6ICG6 404 aaPredicted RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 TMC7Q7Z402 723 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 HPS6Q86YV9 775 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 GABPB2Q8TAK5 448 aaPredicted RBP26.38■■□□□ 1.81
HLA-C-208ENST00000487245 GPR78Q96P69 363 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 SERPINI1Q99574 410 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 NDFIP2Q9NV92 336 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 IL37Q9NZH6 218 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 STK39Q9UEW8 545 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 MYO16Q9Y6X6 1858 aa26.38■■□□□ 1.81
HLA-C-208ENST00000487245 NPHS1O60500 1241 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 COL6A1P12109 1028 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 TFEBP19484 476 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 ACBD5Q5T8D3 534 aaPredicted RBP26.37■■□□□ 1.81
HLA-C-208ENST00000487245 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.37■■□□□ 1.81
HLA-C-208ENST00000487245 ATP6V0D2Q8N8Y2 350 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 ARNT2Q9HBZ2 717 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 OSER1Q9NX31 292 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 MPP6Q9NZW5 540 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 ADAMTS6Q9UKP5 1117 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 MYLKQ15746 1914 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 PLXNA3P51805 1871 aa26.37■■□□□ 1.81
HLA-C-208ENST00000487245 GOLGA8TH3BQL2 631 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 PHGDHO43175 533 aaKnown RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 B4GALT3O60512 393 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 TADA2AO75478 443 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 VAPBO95292 243 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 PIK3R6Q5UE93 754 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 LSMEM2Q8N112 164 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 FSTL5Q8N475 847 aaPredicted RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 KCTD4Q8WVF5 259 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 MRGPRX2Q96LB1 330 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 ZYG11BQ9C0D3 744 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 PRDM5Q9NQX1 630 aaPredicted RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 OLA1Q9NTK5 396 aaKnown RBP26.36■■□□□ 1.81
HLA-C-208ENST00000487245 NUDT5Q9UKK9 219 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 H3BNX3 289 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 PMPCBO75439 489 aa26.36■■□□□ 1.81
HLA-C-208ENST00000487245 SORBS2O94875 1100 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms