RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 FAM131CQ96AQ9 280 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 GTPBP2Q9BX10 602 aaKnown RBP7.29□□□□□ -1.24
UBE4B-209ENST00000487244 DEF6Q9H4E7 631 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 LRRC19Q9H756 370 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 NHEJ1Q9H9Q4 299 aaPredicted RBP7.29□□□□□ -1.24
UBE4B-209ENST00000487244 EBF2Q9HAK2 575 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 PDFQ9HBH1 243 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 RAB6BQ9NRW1 208 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 ETNK2Q9NVF9 386 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 CTTNBP2NLQ9P2B4 639 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 FZD4Q9ULV1 537 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 SCML1Q9UN30 329 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 TFR2Q9UP52 801 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 TDRD6O60522 2096 aaKnown RBP7.29□□□□□ -1.24
UBE4B-209ENST00000487244 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
UBE4B-209ENST00000487244 SPEGQ15772 3267 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CHD8Q9HCK8 2581 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 A0A1B0GVT2 93 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 MED19A0JLT2 244 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 POM121CA8CG34 1229 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 TMEM110-MUSTN1A8MSY1 372 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 C1QTNF3-AMACRE9PGA6 284 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 TM4SF5O14894 197 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 BCAT2O15382 392 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PLRG1O43660 514 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 BUB1O43683 1085 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 KDELR3O43731 214 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 GJB3O75712 270 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 TPM1P09493 284 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 H2AFZP0C0S5 128 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 AMPD1P23109 780 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 MAT2AP31153 395 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ETFBP38117 255 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 SSR1P43307 286 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CSNK1EP49674 416 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PAPOLAP51003 745 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 LIMK1P53667 647 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 GRIK2Q13002 908 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PIGHQ14442 188 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PUM1Q14671 1186 aaKnown RBP eCLIP7.28□□□□□ -1.247e-6■□□□□ 10.1
UBE4B-209ENST00000487244 DPYSL2Q16555 572 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 UAP1L1Q3KQV9 507 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PARP15Q460N3 678 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ATP13A4Q4VNC1 1196 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CARD16Q5EG05 197 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 WDR45BQ5MNZ6 344 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 AFMIDQ63HM1 303 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 H2AFVQ71UI9 128 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 DGLUCYQ7Z3D6 616 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 POLNQ7Z5Q5 900 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 DSG4Q86SJ6 1040 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF354CQ86Y25 554 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CNGA4Q8IV77 575 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PCDH20Q8N6Y1 951 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 OR2T34Q8NGX1 318 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CTNNBL1Q8WYA6 563 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 EXOC2Q96KP1 924 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CCDC42Q96M95 316 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 SLC6A18Q96N87 628 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CSPG4P5Q96PW8 444 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 NUSAP1Q9BXS6 441 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CEP44Q9C0F1 390 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 SLC39A8Q9C0K1 460 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PCED1AQ9H1Q7 454 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 RETREG1Q9H6L5 497 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ZDHHC6Q9H6R6 413 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 CATSPERBQ9H7T0 1116 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 IL21RQ9HBE5 538 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 SGK2Q9HBY8 427 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 PCDH18Q9HCL0 1135 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 TM9SF3Q9HD45 589 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ZNHIT6Q9NWK9 470 aaKnown RBP7.28□□□□□ -1.24
UBE4B-209ENST00000487244 LHX3Q9UBR4 397 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 HPCAL4Q9UM19 191 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 SLC6A14Q9UN76 642 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 NCKAP1Q9Y2A7 1128 aa7.28□□□□□ -1.24
UBE4B-209ENST00000487244 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3DA0A087WVF3 549 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3IA0A087WXS9 549 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3EA0A087X179 549 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3KA0A087X1G2 549 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 A0A1B0GTW7 788 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 SLC35F4A4IF30 521 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3FA6NER0 549 aaPredicted RBP7.27□□□□□ -1.25
UBE4B-209ENST00000487244 LRRC72A6NJI9 287 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 EIF3CLB5ME19 914 aaKnown RBP7.27□□□□□ -1.25
UBE4B-209ENST00000487244 TBC1D3LB9A6J9 549 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 H3BRJ5 948 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 MYO1FO00160 1098 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 DFFAO00273 331 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 KRIT1O00522 736 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 GIPC1O14908 333 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 INSIG1O15503 277 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 DAPK3O43293 454 aa7.27□□□□□ -1.25
UBE4B-209ENST00000487244 FOXD2O60548 495 aaPredicted RBP7.27□□□□□ -1.25
UBE4B-209ENST00000487244 PRAMEF11O60813 436 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms