RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 RENBPP51606 427 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 NEK3P51956 506 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 LIMK1P53667 647 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 COPS2P61201 443 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 LMNB2Q03252 620 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 GBE1Q04446 702 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 RAD51Q06609 339 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 LBRQ14739 615 aaKnown RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 PPP2R5EQ16537 467 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 RALGPS1Q5JS13 557 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 PARS2Q7L3T8 475 aaKnown RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 RCOR2Q8IZ40 523 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 DEFB119Q8N690 84 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 OR14C36Q8NHC7 312 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 KIAA1524Q8TCG1 905 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 GANCQ8TET4 914 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 KRT35Q92764 455 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 RAB7BQ96AH8 199 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 ECHDC3Q96DC8 303 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 ZNF641Q96N77 438 aaPredicted RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 ZDHHC6Q9H6R6 413 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 EFR3BQ9Y2G0 817 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 DCHS1Q96JQ0 3298 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 ARID1BQ8NFD5 2236 aaPredicted RBP13.33□□□□□ -0.27
SF1-216ENST00000486867 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 A0A1B0GTW7 788 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 A0A1W2PPC4 97 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 LNP1A1A4G5 178 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 CCDC66A2RUB6 948 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 MEI4A8MW99 385 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 PRR5-ARHGAP8B1AHC4 643 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 PATE3B3GLJ2 98 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 KRIT1O00522 736 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 AREL1O15033 823 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 MATN3O15232 486 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SPINT1O43278 529 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
SF1-216ENST00000486867 ADRB3P13945 408 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 GKP32189 559 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 MAPK8P45983 427 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SUOXP51687 545 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 AP1S1P61966 158 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 ARHGAP8P85298 464 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 PPIDQ08752 370 aaKnown RBP13.33□□□□□ -0.28
SF1-216ENST00000486867 SF3A2Q15428 464 aaKnown RBP13.33□□□□□ -0.28
SF1-216ENST00000486867 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 TIGD7Q6NT04 549 aaPredicted RBP13.33□□□□□ -0.28
SF1-216ENST00000486867 GDPD4Q6W3E5 623 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SPOCD1Q6ZMY3 1216 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SRLQ86TD4 932 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 OR6K2Q8NGY2 324 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 PDLIM2Q96JY6 352 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 NSMCE3Q96MG7 304 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 CINPQ9BW66 212 aaPredicted RBP13.33□□□□□ -0.28
SF1-216ENST00000486867 TSGA10Q9BZW7 698 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 EBF2Q9HAK2 575 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 DYRK4Q9NR20 520 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 TRIM10Q9UDY6 481 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
SF1-216ENST00000486867 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
SF1-216ENST00000486867 TDRD6O60522 2096 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 C16orf96A6NNT2 1141 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 APOL1O14791 398 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 BCAT2O15382 392 aaPredicted RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 INSIG1O15503 277 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 UGT2B4P06133 528 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 GNSP15586 552 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 MAOBP27338 520 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 NR2C2P49116 596 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 PPP2CBP62714 309 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 PPP2CAP67775 309 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 IRX4P78413 519 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 TFDP2Q14188 446 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 CCDC6Q16204 474 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 POM121L1PQ3SYA9 428 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 TRIM61Q5EBN2 209 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 TCEAL6Q6IPX3 200 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 KIAA2013Q8IYS2 634 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 SYCE1Q8N0S2 351 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 TCEAL3Q969E4 200 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 RBM41Q96IZ5 413 aaKnown RBP13.32□□□□□ -0.28
SF1-216ENST00000486867 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 KLHL32Q96NJ5 620 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 NUDCD1Q96RS6 583 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
SF1-216ENST00000486867 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms