RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NELL2Q99435 816 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TDRD1Q9BXT4 1180 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CPEB1Q9BZB8 566 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 RAB17Q9H0T7 212 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SCUBE2Q9NQ36 999 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 GRHL1Q9NZI5 618 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 HECAQ9UBI9 543 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 FAM153AQ9UHL3 310 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 EVLQ9UI08 416 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 DMGDHQ9UI17 866 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 UTP11Q9Y3A2 253 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 WASF2Q9Y6W5 498 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TCRBV7S3A2A0A539 114 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ESYT3A0FGR9 886 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TSPAN11A1L157 253 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 FAM170BA6NMN3 283 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ERI2A8K979 691 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ALOX15BO15296 676 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 HTRA2O43464 458 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 FZD6O60353 706 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SOCS5O75159 536 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ANXA9O76027 345 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SUN1O94901 812 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 PIGNO95427 931 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 POP4O95707 220 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 EPHX1P07099 455 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SERPINF2P08697 491 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TPSB2P20231 275 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 COL9A1P20849 921 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 GKP32189 559 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ADRA1AP35348 466 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ADCY8P40145 1251 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 WASP42768 502 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 COPAP53621 1224 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 DRG2P55039 364 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 GEMP55040 296 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TUBB4BP68371 445 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ITKQ08881 620 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TRAF2Q12933 501 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 MPP3Q13368 585 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 GRM3Q14832 879 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 UBXN2BQ14CS0 331 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TPSAB1Q15661 275 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 MYLK3Q32MK0 819 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ANKRD22Q5VYY1 191 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 KIAA1211LQ6NV74 962 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 HIBCHQ6NVY1 386 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ZNF534Q76KX8 674 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 HOOK3Q86VS8 718 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TAB3Q8N5C8 712 aaPredicted RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 NAT8LQ8N9F0 302 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TXNDC5Q8NBS9 432 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 LRRC45Q96CN5 670 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ECHDC3Q96DC8 303 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SNF8Q96H20 258 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 LRIG1Q96JA1 1093 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TRIB3Q96RU7 358 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 FAM129BQ96TA1 746 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 HEPHQ9BQS7 1158 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TRIM31Q9BZY9 425 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ATP13A3Q9H7F0 1226 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 ANKZF1Q9H8Y5 726 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 FBRSQ9HAH7 460 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 LMAN1LQ9HAT1 526 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 PRSS16Q9NQE7 514 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 GDF3Q9NR23 364 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 UBP1Q9NZI7 540 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 WHRNQ9P202 907 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SUN2Q9UH99 717 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 IL36AQ9UHA7 158 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 SHOC2Q9UQ13 582 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 AAR2Q9Y312 384 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 NUP205Q92621 2012 aa9.68□□□□□ -0.86
MCF2L-227ENST00000486806 TCF20Q9UGU0 1960 aaKnown RBP9.68□□□□□ -0.86
MCF2L-227ENST00000486806 F5P12259 2224 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 LOC285095A0A1B0GVY8 99 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GOLGA6CA6NDK9 693 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GOLGA6BA6NDN3 693 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 BNIP3LO60238 219 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 LEFTY1O75610 366 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PRLP01236 227 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 APRTP07741 180 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RHOXF2BP0C7M4 288 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 ATXN1LP0C7T5 689 aaKnown RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GOLGA6DP0CG33 693 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 HOXB2P14652 356 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SERPINA4P29622 427 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 ECHS1P30084 290 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RECQLP46063 649 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RPS9P46781 194 aaKnown RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 WNT3AP56704 352 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 CDK16Q00536 496 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GUCY2DQ02846 1103 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms