RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 OR6C4Q8NGE1 309 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 PARD3BQ8TEW8 1205 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 TAF4BQ92750 862 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 ALG14Q96F25 216 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 FCRL2Q96LA5 508 aaPredicted RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 HDAC8Q9BY41 377 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 SLC13A1Q9BZW2 595 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 SPRY4Q9C004 299 aa8.42□□□□□ -1.06
XRN1-212ENST00000486211 GPN2Q9H9Y4 310 aaPredicted RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 APOBEC3GQ9HC16 384 aaKnown RBP8.42□□□□□ -1.06
XRN1-212ENST00000486211 LOC101059948A0A1B0GTJ6 334 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 TYW5A2RUC4 315 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 MKRN2OSH3BPM6 223 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 MEN1O00255 615 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 KPNA3O00505 521 aaPredicted RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 FPGTO14772 594 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 EIF3DO15371 548 aaKnown RBP eCLIP8.41□□□□□ -1.06
XRN1-212ENST00000486211 RPN1P04843 607 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 ZNF18P17022 549 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 TRIM21P19474 475 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 GJB2P29033 226 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 CHRNA3P32297 505 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 NEK4P51957 841 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 TBX4P57082 545 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 ADIGQ0VDE8 80 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 SLC12A1Q13621 1099 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 PTK2BQ14289 1009 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 ACCSLQ4AC99 568 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 PRR30Q53SZ7 412 aaPredicted RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 CERCAMQ5T4B2 595 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 CXorf57Q6NSI4 855 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 CENPQQ7L2Z9 268 aaPredicted RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 SH2D3CQ8N5H7 860 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 TMIEQ8NEW7 156 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 OR2A12Q8NGT7 310 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 ZNF507Q8TCN5 953 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 DDX50Q9BQ39 737 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 DDA1Q9BW61 102 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 CYP3A43Q9HB55 503 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 ABCC13Q9NSE7 274 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 XPO7Q9UIA9 1087 aaKnown RBP8.41□□□□□ -1.06
XRN1-212ENST00000486211 GGT7Q9UJ14 662 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 PILRAQ9UKJ1 303 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 GPR34Q9UPC5 381 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 ENTPD4Q9Y227 616 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 KCTD3Q9Y597 815 aa8.41□□□□□ -1.06
XRN1-212ENST00000486211 PCSK5Q92824 1860 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 SPG11Q96JI7 2443 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 ARHGAP10A1A4S6 786 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.06
XRN1-212ENST00000486211 PNLIPP16233 465 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 GLB1P16278 677 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.06
XRN1-212ENST00000486211 CD58P19256 250 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 GPC1P35052 558 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 DLG4P78352 724 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 CCDC15Q0P6D6 951 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 TESK1Q15569 626 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 ZNF394Q53GI3 561 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 FAXCQ5TGI0 409 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 ARHGAP17Q68EM7 881 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 MACC1Q6ZN28 852 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 RIPOR1Q6ZS17 1223 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 SFTPA2Q8IWL1 248 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 C12orf56Q8IXR9 622 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 UNC5BQ8IZJ1 945 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 LGI2Q8N0V4 545 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 FSTL5Q8N475 847 aaPredicted RBP8.4□□□□□ -1.06
XRN1-212ENST00000486211 ANKRD52Q8NB46 1076 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 CHST14Q8NCH0 376 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 RCBTB1Q8NDN9 531 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 DENND6BQ8NEG7 585 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 OR52K2Q8NGK3 314 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 SCG3Q8WXD2 468 aaKnown RBP8.4□□□□□ -1.06
XRN1-212ENST00000486211 STARD8Q92502 1023 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 ART4Q93070 314 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 CENPTQ96BT3 561 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 SLC39A13Q96H72 371 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 RDH14Q9HBH5 336 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 CYP4F12Q9HCS2 524 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 TLK1Q9UKI8 766 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 OR51B4Q9Y5P0 310 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 FADS3Q9Y5Q0 445 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 LRP4O75096 1905 aa8.4□□□□□ -1.06
XRN1-212ENST00000486211 CROCCQ5TZA2 2017 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 IGHV5-10-1A0A0J9YXX1 117 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 IGLON5A6NGN9 336 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 XPO1O14980 1071 aaKnown RBP8.39□□□□□ -1.07
XRN1-212ENST00000486211 B4GAT1O43505 415 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 AP1G1O43747 822 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 BNIP3LO60238 219 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 DIAPH2O60879 1101 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 MT-CO1P00395 513 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 HLA-DRAP01903 254 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 ALPIP09923 528 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 ADRB3P13945 408 aa8.39□□□□□ -1.07
XRN1-212ENST00000486211 IGFALSP35858 605 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms